LOCUS BC044907 3799 bp mRNA linear HUM 21-JUL-2006
DEFINITION Homo sapiens ankyrin and armadillo repeat containing, mRNA (cDNA
clone MGC:42906 IMAGE:4836761), complete cds.
ACCESSION BC044907
VERSION BC044907.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3799)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3799)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 72 Row: j Column: 8.
FEATURES Location/Qualifiers
source 1..3799
/db_xref="H-InvDB:HIT000097963"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:42906 IMAGE:4836761"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3799
/gene="ANKAR"
/gene_synonym="FLJ25415"
/db_xref="GeneID:150709"
/db_xref="HGNC:HGNC:26350"
/db_xref="MIM:609803"
CDS 649..3054
/gene="ANKAR"
/gene_synonym="FLJ25415"
/codon_start=1
/product="ANKAR protein"
/protein_id="AAH44907.1"
/db_xref="GeneID:150709"
/db_xref="HGNC:HGNC:26350"
/db_xref="MIM:609803"
/translation="MKYAENIMLKLTFSTTQIQQYENVFIFETGYWLTNAIKYNQDYL
DICTYQRLQQRLYLQKKIIQKHFEKKKDIRRGIGYLKLICFLIPFLLSLKKKMKVPYL
SSLLQPFSDDKVKTERELPPFIYGRDFKCQNFHYKENQYFHVHGGIEFDISTPSIENA
LEDFQKNLEKIRDCAANTFIEDSGYKEYYSIPVMEFHGKSYYVIYFELETFYQQLYKT
QWWGAINEIVNNLRLKRLPLTDAQLHEQFKKKLGFKRAMKCKSIPFGMKSAVERGLSA
VFHTFSRKTSSSTINVSDEAGYTIFHHAALHNRVSIICQLCNANFKVNQRRFVTFSQG
PTPLHLAAQACSLETTVCLLCSKADYTLSEKRGWMPIHFAAFYDNVCIIIALCRKDPS
LLEAEATAENQCTPLLLAATSGALDTIQYLFSIGANWRKTDIKGNNIIHLSVLTFHTE
VLKYIIKLNIPELPVWKTLVEMLQCESYKRRMMAVMSLEVICLANDQYWRCILDAGTI
PALINLLKSSKIKLQCKTVGLLSNISTHKSAVHALVEAGGIPSLINLLVCDEPEVHSR
CAVILYDIAQCENKDVIAKYNGIPSLINLLNLNIENVLVNVMNCIRVLCIGNENNQRA
VREHKGLPYLIRFLSSDSGLFNLFLNSFEDVLKAVSSAAIAEVGRDNKEIQDAIAMEG
AIPPLVALFKGKQISVQMKGAMAVESLASHNALIQKAFLEKSLTKYLLKLLKAFQIDV
KEQGAVALWALAGQTLKQQKYMAEQIGYSFIINMLLSPSAKMQYVGYLLKSRLCINTF
CLQ"
BASE COUNT 1234 a 742 c 803 g 1020 t
ORIGIN
1 gtattccaac tcgggactgc ctcaacgccc ggcgctgtct cctctgctac tctgtttcgg
61 tgttttagca gaggcagata gtgagggcgg cacagtgccc acggcatgcc gctggactaa
121 gcgctaagcg ggcttgggat gatgcgcacg cggggggtct gagccagcca aggggccggg
181 cgccgcctgg gggcgctgcg gctgctgcgg gacgcaccag gcctagtcgc ccgcaggctc
241 cgcccgagga gcagcccagc caccccaggg cccggaggac caaccgcttc gacccgcgcc
301 cgggcggcgg cagtgttggc cggcgaggcg aggagggccg ggccgccacg gtggggcgaa
361 aagccctgaa agttcctctc agttccttcc ggtgcgcctc ccgctcgccc ttgcggaggc
421 cctgagggcg gattcaaggc cccgcgagaa gccatctgag gcggcgacga ctgttctcag
481 ccccacggga acgccgcgga cgcagcgtcc ctctcccgga caagaaaaca gccattctag
541 agtttgactg atattacaaa ggatccagac tttaatgaaa tctatgatga agacgtgaat
601 gaagatccaa catatgatcc caacagccct gaagaaacag ctgtatttat gaaatatgct
661 gaaaatatta tgctaaagtt aacattcagt accacacaaa ttcaacagta tgaaaatgtc
721 tttatatttg aaacaggcta ttggcttact aatgctataa aatataatca ggattatctt
781 gatatctgta cctaccagag actacagcaa agattatatc ttcaaaaaaa gattattcaa
841 aaacactttg agaagaaaaa agatatcaga agagggatag gatacctaaa gttaatatgt
901 tttctgattc catttctact gagtttaaag aagaaaatga aagttccata tttaagtagt
961 ctgcttcagc ctttttcaga tgacaaggtc aagacagagc gagaattgcc tccatttatt
1021 tatggaagag attttaaatg ccagaatttt cactacaaag agaatcaata ttttcatgtt
1081 catggaggaa ttgaatttga tatcagcacc ccttcaattg agaatgcctt ggaagatttt
1141 cagaaaaatt tagaaaaaat acgagattgt gctgctaata catttataga agattcagga
1201 tataaagaat attactcaat accagtcatg gaatttcatg gaaaaagcta ctatgtgatc
1261 tattttgaac tagaaacttt ctatcagcaa ctatataaga cacagtggtg gggagccata
1321 aatgaaatag tgaacaatct gagactgaaa agacttccac tgacagatgc tcaattacat
1381 gaacaattta agaaaaagct tggtttcaaa agagctatga aatgcaagag tattccattt
1441 ggtatgaagt ccgctgttga aagagggttg tctgcagttt tccacacatt tagccgtaaa
1501 acctcaagct caacaatcaa tgtttcagat gaagcaggtt atactatttt tcatcatgct
1561 gccctgcaca acagagtttc tattatatgt caactgtgca atgctaactt caaggtcaac
1621 cagaggcgct ttgttacgtt cagccaaggt ccaacacctc tacaccttgc tgcacaggct
1681 tgctcattag aaacaacagt ttgtctactg tgttccaaag ctgattacac gctttctgaa
1741 aaaagaggct ggatgccgat tcactttgcc gctttctatg acaacgtttg catcattatt
1801 gctctctgta ggaaggatcc tagtttgcta gaagctgagg caacagctga gaatcagtgc
1861 actccactgt tacttgctgc cacttcagga gcactggaca ctattcaata cctgttttct
1921 atcggtgcta actggagaaa aacagatatt aaaggaaata atataatcca tttatcagtg
1981 ttaacctttc atacagaggt tctcaaatat ataataaaat taaatattcc tgaactccca
2041 gtgtggaaaa ctttggtaga aatgttacag tgtgaaagct ataaacgaag gatgatggcc
2101 gtcatgtcct tggaagtaat ttgcttagca aatgatcaat actggagatg tattttggat
2161 gcaggcacca ttcctgcctt aatcaatcta ttaaaaagtt ccaaaataaa actgcagtgc
2221 aaaactgttg ggttattgag taatatctca acccacaaaa gtgcagtgca tgctttggta
2281 gaagcgggag gcattccatc tctaatcaac ctactggttt gtgatgagcc tgaagtacac
2341 tctcgctgtg ctgtcattct atatgatatt gctcaatgtg aaaacaagga tgttattgcc
2401 aaatataatg gaatcccaag cctgataaat ctattgaact taaacataga aaatgtgcta
2461 gtaaatgtaa tgaactgtat acgggtattg tgtataggaa atgaaaacaa tcaaagagct
2521 gtgagagaac ataaaggcct cccatatctt atcagatttc tgagttctga ttcaggttta
2581 tttaacttgt tcttaaattc atttgaagat gtgttgaagg ctgtatcttc tgctgcaatt
2641 gctgaggttg ggcgtgacaa taaggaaatt caggatgcta tagctatgga gggagcgatt
2701 cctcctctgg tggctctttt taaagggaaa caaattagtg tccaaatgaa aggtgcaatg
2761 gctgtggaat cactggcaag tcacaacgct cttatacaga aagcatttct ggaaaaatcg
2821 ttaactaaat atcttttaaa actcctaaag gcatttcaaa tagatgttaa ggaacaagga
2881 gctgttgcac tttgggcctt ggcaggacaa acactaaaac aacaaaaata tatggcagaa
2941 caaattggat acagctttat aataaatatg cttttgtcac catcagctaa aatgcagtat
3001 gttggatatt tgcttaagag caggctatgc attaacactt tttgccttca ataatcgctt
3061 tcaacaatac ttaatattgg aaagtggaat aatgaccata tctattttcg aacgttttct
3121 tgaatcaaca gttgaaactg agaaggcaat ggcagcattt cagattgttg tactggctaa
3181 agtcattaga gatatggacc atattacttt gtctgcaaga ggtgttacta ttttagttga
3241 tagtctgtat tcagttcaga cttctactat tgtcttgaca gggaatttaa tagcaagcct
3301 ggctcattct agagctggta tcccagaagc atttaccaca ttaggaacaa tccaacggct
3361 ctgctatcat ttgtactcgg gaatagaaga ggttcgtgca gcttgttcct ctgctcttgg
3421 ctacttaaca tacaatgcaa atgctttccg catcctatta aaagaatgca ggaataaacc
3481 taatcagttc attcgtataa aaaataatat cagcagagat gcaagtatta acccagcatt
3541 tttaaaggaa tttcaaatgc aacaaacact ggtgggactt ccttccttaa gtctggagaa
3601 gaatggagga ccatccataa ttcctatctt taaaagagtt ttcctaggac ttcagctgag
3661 accatgaaac atagaagtgg agaaaagaag gaatgcatta ctgaaggaaa atcaataaat
3721 acggaagctg ggaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
3781 aaaggaaaaa aaaaaaaaa
//