LOCUS BC044814 1415 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens coiled-coil domain containing 89, mRNA (cDNA clone
MGC:34736 IMAGE:5167843), complete cds.
ACCESSION BC044814
VERSION BC044814.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1415)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1415)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 51 Row: a Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22749428.
FEATURES Location/Qualifiers
source 1..1415
/db_xref="H-InvDB:HIT000052895"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:34736 IMAGE:5167843"
/tissue_type="Brain, adult medulla"
/clone_lib="NIH_MGC_119"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1415
/gene="CCDC89"
/gene_synonym="FLJ38159"
/db_xref="GeneID:220388"
/db_xref="HGNC:HGNC:26762"
CDS 44..1168
/gene="CCDC89"
/gene_synonym="FLJ38159"
/codon_start=1
/product="coiled-coil domain containing 89"
/protein_id="AAH44814.1"
/db_xref="GeneID:220388"
/db_xref="HGNC:HGNC:26762"
/translation="MRAPMLQKQQAPRMDTPPPEERLEKQNEKLNNQEEETEFKELDG
LREALANLRGLSEEERSEKAMLRSRIEEQSQLICILKRRSDEALERCQILELLNAELE
EKMMQEAEKLKAQGEYSRKLEERFMTLAANHELMLRFKDEYKSENIKLREENEKLRLE
NSSLFSQALKDEEAKVLQLTVRCEALTGELETLKERCAQDACQAQAREKELLELQSQQ
ACTHTKETEQLRSQLQTLKQQHQQAVEQIAKAEETHSSLSQELQARLQTVTREKEELL
QLSIERGKVLQNKQAEICQLEEKLEIANEDRKHALERFEQEAVAVDSNLRVRELQRKV
DGIQKAYDELRLQSEAFKKHSLDLLSKERELNGKLRHLSP"
BASE COUNT 502 a 297 c 394 g 222 t
ORIGIN
1 gtttgaaatc tgaggggaaa agactgtagt cagcccttag tggatgagag cgcctatgct
61 ccagaaacag caggctccca ggatggacac cccgccccct gaagaacgct tagagaagca
121 aaatgaaaaa ctgaacaacc aggaagagga gacggagttt aaggaactgg acggtctgag
181 ggaagccttg gcaaacctcc ggggactgtc agaggaggag aggagcgaga aggctatgct
241 tcgctcccgc attgaagagc agtcccagct catctgcatc ctgaagcgga ggtcagatga
301 ggccctggag cgctgccaga tcctagagct gctcaatgca gagctggagg agaagatgat
361 gcaggaggct gagaagctca aggcccaggg tgagtacagt cggaaactag aggaacgctt
421 tatgacccta gcagccaacc acgagttgat gctccgcttc aaggatgaat acaagagtga
481 gaacatcaag ctgagggagg agaatgagaa gctgaggctg gagaatagca gcctcttcag
541 ccaggctctg aaggatgagg aggcgaaagt attacagctc acagtccggt gtgaggccct
601 cactggggag ctagaaacgc tgaaggagag gtgtgctcag gatgcctgcc aggcacaggc
661 gcgcgagaag gagctgctgg agctacagag ccagcaggcc tgcacccaca ccaaggagac
721 agaacagctg cgcagccagc tgcagaccct caagcagcag caccagcagg ctgtggagca
781 gatagctaag gcagaggaga cacacagcag cctgagccag gagctgcagg ccaggctgca
841 gaccgtcact agagagaaag aggagttgct gcagctgtcc attgaaaggg gcaaagtgct
901 tcagaacaaa caggcagaga tctgccagct tgaggaaaag ttggagatag caaatgaaga
961 caggaagcat gcgctggagc ggtttgagca agaggcagtg gctgtggaca gcaacttgag
1021 agtcagggag cttcagcgca aagtagatgg gatccagaag gcctacgatg aactcaggct
1081 gcagtctgaa gccttcaaaa agcacagctt ggatctttta agcaaggaga gagaactcaa
1141 tggcaaactc cgccatctct ctccataggg aagtttctgc ttcctctggc ctgcaattca
1201 gaattcaaat atttgcgtct tagcattatg gcaagagtaa agatgatatc ccatttatta
1261 tactttcaag cacaaaaggc aactcaaaga aaagctactt tactatgaaa aaaaaaaaaa
1321 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1381 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaa
//