LOCUS BC044799 3353 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens chromosome 4 open reading frame 21, mRNA (cDNA clone
MGC:42908 IMAGE:4836807), complete cds.
ACCESSION BC044799
VERSION BC044799.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3353)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3353)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 72 Row: j Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38016155.
FEATURES Location/Qualifiers
source 1..3353
/db_xref="H-InvDB:HIT000052894"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:42908 IMAGE:4836807"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3353
/gene="C4orf21"
/gene_synonym="FLJ11331"
/db_xref="GeneID:55345"
/db_xref="HGNC:HGNC:25654"
CDS 117..3305
/gene="C4orf21"
/gene_synonym="FLJ11331"
/codon_start=1
/product="chromosome 4 open reading frame 21"
/protein_id="AAH44799.1"
/db_xref="GeneID:55345"
/db_xref="HGNC:HGNC:25654"
/translation="MESQEFIVLYTHQKMKKSKVWQDGILKITHLGNKAILYDDKGAC
LESLFLKCLEVKPGDDLESDRYLITVEEVKVAGAIGIVKQNVNKEAPELNSRTFISSG
RSLGCQPSGLKRKFTGFQGPRQVPKKMVIMESGESAASHEAKKTGPTIFSPFCSMPPL
FPTVGKKDVNNILADPENIVTYKNRERNAMDFSSVFSPSFQINPEVLCEENYFCSPVN
SGNKLSDSLLTNEPVKRDSLASHYSGVSQNIRSKAQILALLKSESSSSCEELNSEMTE
HFPQKQPQGSLKIATKPKYLIQQEECAEMKSTENLYYQHQSENTMRNKSRWAMYLSSQ
SSPIHSSTVDGNDTERKPKAQEDDVNSNLKDLSLQKIIQFVETYAEERKKYNVDQSVG
NNDPSWNQEVKLEIPSFNESSSLQVTCSSAENDGILSESDIQEDNKIPFNQNDKGCIK
ESVLIKENAQEVNTCGTLEKEYEQSESSLPELKHLQIESSNNSRISDDITDMISESKM
DNESLNSIHESLSNVTQPFLEVTFNLNNFETSDTEEESQESNKISQDSESWVKDILVN
DGNSCFQKRSENTNCEEIEGEHLPFLTSVSDKPTVTFPVKETLPSQFCDKTYVGFDMG
ICKTENTGKEIEEYSDTLSNFESFKWTDAVYGDNKEDANKPIQEVRINYDFALPPNKS
KGINMNLHIPHIQNQIAENSNLFSEDAQPQPFILGSDLDKNDEHVLPSTSSSDNSVQL
LNTNQNHYECIALDKSNTHISNSLFYPLGKKHLISKDTEAHISEPEDLGKIRSPPPDH
VEVETAREGKQYWNPRNSSELSGLVNTISILKSLCEHSTALDSLEILKKKNTVFQQGT
QQTYEPDSPPEVRKPFITVVSPKSPHLHKDSQQILKEDEVELSEPLQSVQFSSSGSKE
ETAFQAVIPKQIERKTCDPKPVEFQGHQVKGSATSGVMVRGHSSQLGCGQFPDSTEYE
NFMTETPELPSTCMQIDFLQVTSPEENISTLSPVSTFSLNSRDEDFMVEFSETSLKAR
TLPDDLHFLNLEGSRYHIALISVYSFKMKFFI"
BASE COUNT 1182 a 583 c 648 g 940 t
ORIGIN
1 acgttgtttc gcgggagaaa ttcgaaagtg gattttgtgc aatttgacag gtggtataaa
61 tagttgaata tttcctattt tctggaccca gctggtttat aacttcagaa gaaataatgg
121 aaagccaaga atttattgtt ctatatactc atcaaaagat gaagaagtca aaagtgtggc
181 aagatggaat tctgaagatc actcacttag gaaacaaagc aattttatat gatgacaaag
241 gagcatgttt ggagagtctg tttcttaaat gccttgaggt gaaacctgga gatgacttag
301 aaagtgatcg atacttaatc acagttgaag aggttaaagt tgctggagcc ataggtattg
361 ttaagcagaa tgtcaataaa gaagcaccag agttaaattc aaggacattt atatcctctg
421 gccgatctct tggatgtcag ccctctggct taaaaaggaa gtttactggt tttcaaggac
481 cacgtcaggt tccaaagaaa atggttatta tggaaagtgg tgaatcagct gcatcacatg
541 aggctaagaa aactggccct actatttttt ctccattctg cagcatgcct cctttgtttc
601 ctactgttgg caagaaagat gtaaataata tactggcaga ccctgagaac attgtgactt
661 acaagaacag ggagagaaat gccatggatt tttcttcggt tttttctcca tccttccaga
721 ttaacccaga agtgctgtgt gaagaaaatt atttttgctc acctgtcaat tctggaaata
781 agctttcaga ctctttactg accaatgagc ctgtgaaaag agatagtttg gcatctcact
841 attcaggagt ttcacaaaac atcagaagca aagcacagat attagctctt ctgaagtccg
901 aatcatctag ttcatgtgag gaactaaatt ctgagatgac agagcatttt cctcaaaaac
961 aaccacaagg aagtttaaaa attgctacta aaccaaagta cctaattcaa caggaagagt
1021 gtgctgagat gaagagcaca gaaaatttat actaccagca tcaatcagaa aataccatga
1081 gaaataaaag ccggtgggcc atgtatttat cctcacagag ttcacctata cattcttcta
1141 ctgtagatgg gaatgataca gaaaggaaac ccaaggccca ggaagatgat gtaaattcta
1201 atttgaaaga cctttcatta caaaaaatta tacagttcgt tgaaacgtat gctgaagaga
1261 ggaaaaagta taatgtagac cagtcagtcg gtaataatga tccatcctgg aatcaggaag
1321 taaaattaga aattccttca ttcaatgaaa gcagtagctt acaggttact tgtagcagtg
1381 cagaaaatga tggtatatta tcagaatctg acattcaaga agataataaa atacctttta
1441 atcaaaatga caaggggtgc attaaagaat cagttctcat taaagaaaat gctcaggagg
1501 taaatacatg tggaacactg gaaaaggagt atgaacaatc agagtcatct ctgccagaac
1561 tgaaacatct ccaaattgaa tctagtaata attctaggat ctctgatgac attacagaca
1621 tgatttctga aagtaaaatg gataatgaaa gtcttaatag tattcatgaa tctctgagta
1681 atgtaacaca accatttttg gaggtaactt ttaatctgaa caattttgag accagtgaca
1741 ctgaggagga atcacaggaa agcaacaaaa tttcccagga ttcagagagt tgggtaaagg
1801 acattttggt taatgatggc aattcatgtt ttcaaaagag gtctgagaat acaaactgtg
1861 aagagattga gggtgaacat ttgccattct taacatctgt tagtgacaaa cctacagtga
1921 catttcctgt taaagagact ctgccatcac agttttgtga taaaacttat gtgggttttg
1981 acatgggaat atgtaaaact gaaaacacag gaaaagaaat agaggagtat agtgacacat
2041 taagcaattt tgaatctttc aagtggactg atgctgtata cggagataat aaagaagatg
2101 ctaataaacc tattcaagaa gtcagaatta actatgattt tgctttaccc ccgaataaat
2161 ctaaaggtat aaacatgaat ttacatattc ctcatattca aaaccagatt gctgaaaaca
2221 gtaatctatt ttcagaagat gctcaacctc agccttttat tttgggaagt gacttagaca
2281 aaaatgatga acatgtttta ccctcaactt ctagtagtga caacagtgtc caactattaa
2341 ataccaatca gaatcactat gaatgtattg cacttgataa atcaaatacc cacatttcca
2401 attctttgtt ttacccactg ggaaaaaagc atcttatttc caaagacaca gaagcacata
2461 tatctgaacc tgaagatttg ggaaagatta gaagtccacc ccctgaccat gttgaggttg
2521 aaactgccag agaaggcaaa caatactgga atcctagaaa ttcttcagaa ctttctggat
2581 tagtaaatac catttctatt ttaaagtcgc tatgtgaaca cagtactgct ttagacagct
2641 tggaaatatt gaaaaagaaa aatactgtct ttcagcaagg aactcaacag acgtatgagc
2701 cagatagccc tcctgaagtg aggaaaccat ttattacagt agtttcacca aagtctcctc
2761 atctgcacaa ggattctcaa cagatactaa aagaagatga agttgaacta agtgaaccac
2821 ttcagtctgt gcagttctct tcctcgggaa gtaaagaaga gactgctttt caagctgtta
2881 ttcctaaaca aatagagaga aaaacctgtg accctaagcc tgttgagttt caaggacatc
2941 aagtaaaagg atcagctact agtggtgtaa tggtcagagg acacagctca cagctaggat
3001 gcggtcagtt tccagatagc actgagtatg aaaactttat gacagagaca ccagagttac
3061 ctagcacgtg tatgcagatt gacttcttgc aggtgacatc accagaagaa aacatctcta
3121 cattgagccc tgtttctacc ttttctttga actcaagaga tgaagacttc atggtagaat
3181 tctctgagac gtccctgaaa gcaagaactt tacctgatga tcttcatttt ctcaacttgg
3241 agggtagtcg ttaccacatt gctctaatat ctgtctattc atttaagatg aagtttttta
3301 tttgagagat tattacacta aatatatctt agaaccaaaa aaaaaaaaaa aaa
//