LOCUS BC044752 3898 bp mRNA linear HTC 17-JUL-2006
DEFINITION Homo sapiens soc-2 suppressor of clear homolog (C. elegans), mRNA
(cDNA clone IMAGE:4826955).
ACCESSION BC044752
VERSION BC044752.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3898)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3898)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 71 Row: p Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 13376518
This clone has the following problem: no 5' EST match.
FEATURES Location/Qualifiers
source 1..3898
/db_xref="H-InvDB:HIT000097925"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4826955"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
BASE COUNT 1219 a 680 c 740 g 1259 t
ORIGIN
1 agggaggaag gagggcgagc gaggaggatg gcggagtcgg ggctcctgac ggaactctaa
61 tgaatcattg attgaccagc actattttac cagttggaat gaatgatcag aaatgggcat
121 agtgctttta gatccaacat gtaacagatg gatgttactc catgctgatt acttcttcaa
181 gccagtactt ttttgattgt gtaggatctt tgtctcttca tctttgaatt caattactgg
241 aaaataaaag gagttcatgt agtttttgtc caggcttgag tcaccatgag tagtagttta
301 ggaaaagaaa aagactctaa agaaaaagat cccaaagtac catcggccaa ggaaagagaa
361 aaggaggcaa aagcctctgg aggttttggg aaagagagca aagaaaaaga acctaagacc
421 aaagggaaag atgccaaaga tggaaagaag gactccagtg ctgcccaacc aggggtggca
481 ttttcagttg acaatacgat caaacggcca aacccagcac ctgggactag aaaaaaatcc
541 agcaatgcag aggtgattaa agagctcaac aaatgccggg aagagaattc aatgcgtttg
601 gacttatcca agagatctat acacatattg ccatcatcaa tcaaagagtt gactcaatta
661 acagaacttt atttatacag taacaaattg cagtccctcc cagcagaggt gggatgttta
721 gtaaatctca tgacactggc tctaagtgaa aattcactta ccagtttgcc tgactctctt
781 gataacttga agaagctgcg gatgcttgat ttacggcata ataaactgag agaaattcct
841 tcagtggtgt ataggctgga ttctctcacc actctttacc ttcgctttaa tcgtataact
901 actgtggaaa aggacatcaa aaacttgtca aaactcagca tgcttagcat tcgagagaac
961 aaaattaaac aactacctgc tgaaattggt gaattatgta acctcattac gctggatgta
1021 gctcgcaatc aacttgaaca ccttccaaag gagattggaa actgtacaca gataaccaac
1081 cttgacttgc agtacaatga actgctagac ctcccagata ctataggaaa cctgtccagt
1141 ttaagtcgtc ttggtctgag atataacaga ctgtcagcaa tacccagatc attagcaaaa
1201 tgcagtgcac ttgaagaatt aaatttagag aacaataaca tttctacttt accagagagt
1261 cttttatcaa gtcttgtgaa actgaatagt ttgaccttag ctagaaattg cttccagttg
1321 tatccagtgg gtggtccatc tcagttttct accatctatt ccctcaacat ggaacacaat
1381 cgaatcaaca aaattccatt tggaattttc tccagagcaa aagtattaag taagctgaat
1441 atgaaggaca atcagttaac atcacttccc ttggattttg gaacttggac cagtatggta
1501 gaattgaatt tagccactaa tcagctcaca aagatccctg aggatgtgtc tggtctcgtt
1561 tctcttgagg ttcttatctt atcaaacaat cttctaaaga agcttcacca tggtcttgga
1621 aaccttagga agttaagaga gttggatcta gaagagaaca aattggaatc cttgccaaat
1681 gaaattgcat atcttaagga tttacagaaa ttagtcttga caaacaacca gttgaccact
1741 cttcccagag gcattggtca ccttactaat ctcacacatc tgggccttgg agagaaccta
1801 cttactcacc ttcctgaaga aattggtaca ctggagaacc tagaagaact gtatttgaat
1861 gacaacccca acctgcatag ccttcccttt gagctggcac tctgcagcaa gctttcaatc
1921 atgagtattg agaactgtcc actcagtcac cttccacctc agattgttgc tggggggcct
1981 tctttcatca ttcagttctt aaagatgcag ggtccatatc gtgccatggt ctgatataaa
2041 tctgctggtc ccacacactg ttcaaaaata gactgccatt aatgtttctt atctatatct
2101 gtatctattt atgtagatat tggtatatgg cagatttata aaaattgcat tatgtgtttc
2161 tgctaataga ggaatcatag ccatttagaa ttttttttaa attctgtaca aaaggcttat
2221 ataagttttc tttgctgaat ttgatggatg tttttctgtt gtgtaatctg atatgccagt
2281 ttgcttaaaa catttgccaa cacattatga agttattaaa tttaagggac agaggtagta
2341 tagttagata tactttctct taggaaaaat aatgggcaaa aatttttgtt gcaacttttc
2401 atatatattt tccccttacc aattgtttta tccttatagt attgtaggcc ctgaaagtag
2461 aatttttctt taacttattt tgagatttga gatttaaatt ttatgtattg tttacagtca
2521 gagtaaatca ctggatttct tttgtttgtt ttgatttgct ctgttttatt cagtcaaatc
2581 tagagtttga atcctctgct aaagaatttg catccactgg tgtaaacagt gaaaggtatt
2641 tgcttgttga aaaaaaaaac tggcaaagtg aaaagataca gtcaaaaatc tagaatttct
2701 ttaattttgc ttctctgacg agttgtgaag taaaatacct gaagtgagtc tttgggtagg
2761 ggaagggtat tgagaccttt tctagtatga atatttttta agtttggggg aagagaaact
2821 tgcagtgaaa aggagttttt tcattcctga aagttgcaga tccacaaaac taacaggata
2881 attgggcaaa taaattacat ataaacacac acaatctata tatgtatata caatgctata
2941 tagatatgta tttattatat cataaactac agtaggtaac tttaaggatt tcttcctatc
3001 cttgtacaat gacatgaatg tctttctttg aaaactgcaa tgtatgtatg tttcaaggtt
3061 atttaacagt gtactatggt tttatatctt gacttgcctt gtacatcttt caattctgga
3121 atatctgtgt ctaagcacaa tatcttcaca ctgtgctgta ttgctgctga actaaatgca
3181 cttttcccca catatggggc actggcttca aacaattcag ttcagtatca ttacttttaa
3241 tctcatcttt cctttcttgg tagttgttaa tacagttatg gaaaagaggc acattgcata
3301 gaagccattg gggagttcag tggaagttct gtaagatgtg catgtactat ttgatgcgtt
3361 ttctttgctt cactgctttt aatacttagc agtattgttg gtctaagtca atttgattat
3421 tgaggagtct cagagcaagg tgcgttctag atgtcatcct aaaaaacact tcatatataa
3481 ttaatcacta ttttgtataa ttacatattg ctgcttgtgt gttttttttt ttttccattt
3541 agttgggcgt tgtgttttac acaaaaccat ttttgaatta aggctatgat attaagatag
3601 aaatttggac tgttgttctg cttttcctgg cactcaaatt catgactagt tttgaggtca
3661 aacctatgtt cgtaatgaga gattttataa ggatcaacta agaaatggaa ggcaggtgaa
3721 gatataaaac cctagaatgc ttaaatgtgc tgtaaaacta ttgtagatgt cactggattt
3781 taccaagtaa tatcctttct tttttttttc cccccatctg ctgtggcttt tcagttaaaa
3841 ttttgtttat aaaaggaatt tgtttattac agctctacct agaaaaaaaa aaaaaaaa
//