LOCUS BC044661 1205 bp mRNA linear HUM 02-DEC-2006
DEFINITION Homo sapiens chromosome 10 open reading frame 93, mRNA (cDNA clone
IMAGE:5188190), complete cds.
ACCESSION BC044661
VERSION BC044661.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1205)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1205)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (17-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 82 Row: d Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 27734836
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1205
/db_xref="H-InvDB:HIT000052892"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5188190"
/tissue_type="Colon, Kidney, Stomach, adult, whole pooled"
/clone_lib="NIH_MGC_116"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1205
/gene="C10orf93"
/gene_synonym="bB137A17.3"
/gene_synonym="RP13-137A17.3"
/db_xref="GeneID:255352"
/db_xref="HGNC:HGNC:26382"
CDS 60..803
/gene="C10orf93"
/gene_synonym="bB137A17.3"
/gene_synonym="RP13-137A17.3"
/codon_start=1
/product="C10orf93 protein"
/protein_id="AAH44661.1"
/db_xref="GeneID:255352"
/db_xref="HGNC:HGNC:26382"
/translation="MDLVITQELARAESQQDAASLKKAYELIKSANLGKSEFDPSESF
SPDLFVLCAEQALKMRQPEVSEDCIQMYFKVKAPITQFLGRAHLCRAQMCAPKSAENL
EEFENCVTEYMKAINFAKGEPRYYFLVYNASVLYWQMVRPFLKPGYRHHLIPSLSQII
NVLSQTEEEDKEWRAELMLELLECYLQAGRKEEAARFCSTAAPFIKSHVPQKYRQIFS
VMVNQRIRNRDVRSNFLKSHCSENCVEIT"
BASE COUNT 407 a 245 c 283 g 270 t
ORIGIN
1 gtgggcggca ggacgcaccg cggaccccgg agagggcgga cgagcagggc gccggcgcca
61 tggacctggt catcacgcag gagctggccc gcgccgagag ccagcaagat gctgcgtcct
121 tgaagaaggc ctacgagttg atcaaatcgg ccaacctagg gaaatcggag tttgacccct
181 cagagagctt cagcccagac ctgtttgttc tgtgtgcaga gcaggccctg aagatgaggc
241 agccagaggt gagcgaggac tgcatccaaa tgtacttcaa ggtgaaggcg cccatcaccc
301 agtttctggg ccgagcgcac ctgtgcaggg cccagatgtg tgccccgaag tcggcagaaa
361 acctggagga atttgaaaat tgcgtgactg agtacatgaa ggccataaac tttgccaaag
421 gagaaccgag gtactacttt ttggtgtaca atgcatcagt cctctactgg cagatggtga
481 ggccgttcct caagcctgga tatcgtcacc atctgatccc cagcctttcc caaatcataa
541 acgtgctgag tcagactgag gaggaagaca aggagtggcg tgctgagctg atgctggaac
601 ttctggagtg ttatctgcaa gccggaagaa aggaggaggc tgccaggttc tgctccacgg
661 cagctccgtt cattaagtct cacgtgccac agaaataccg gcagatattc tctgttatgg
721 taaatcagcg tattagaaat agagacgtaa gaagtaattt tcttaaaagt cattgttcag
781 aaaactgcgt agaaattaca taagtttgct gagagatata aaaatctata tgcatacata
841 catgaacaaa attacataag catattaaaa agaaatagca gttcatccaa tgcaaagatg
901 tatagaactg tgacatttag aaaacaaaac agggtctttt gcctttatcg tcgctcttta
961 aatatttcct ttgtaatagc tttgaatttt tttaaagtta atagaaaatt cacaaagata
1021 caagtaatta ctacaagaat atgtaccaaa agcattcatt catcagcagt ccattttgac
1081 atatggggaa tcagcttaag ttgtatctga aaagctagat acaaaattaa tgagaaaata
1141 aaatctagac acaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1201 aaaaa
//