LOCUS BC044647 1413 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens heparan sulfate (glucosamine) 3-O-sulfotransferase
3A1, mRNA (cDNA clone MGC:52218 IMAGE:5478042), complete cds.
ACCESSION BC044647
VERSION BC044647.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1413)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1413)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (17-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 44 Row: l Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 5174464.
FEATURES Location/Qualifiers
source 1..1413
/db_xref="H-InvDB:HIT000052885"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:52218 IMAGE:5478042"
/tissue_type="Brain, astrocytoma, grade IV"
/clone_lib="NIH_MGC_98"
/lab_host="DH10B"
/note="Vector: pOTB7"
gene 1..1413
/gene="HS3ST3A1"
/gene_synonym="30ST3A1"
/gene_synonym="3OST3A1"
/db_xref="GeneID:9955"
/db_xref="HGNC:HGNC:5196"
/db_xref="MIM:604057"
CDS 164..1384
/gene="HS3ST3A1"
/gene_synonym="30ST3A1"
/gene_synonym="3OST3A1"
/codon_start=1
/product="heparan sulfate (glucosamine)
3-O-sulfotransferase 3A1"
/protein_id="AAH44647.1"
/db_xref="GeneID:9955"
/db_xref="HGNC:HGNC:5196"
/db_xref="MIM:604057"
/translation="MAPPGPASALSTSAEPLSRSIFRKFLLMLCSLLTSLYVFYCLAE
RCQTLSGPVVGLSGGGEEAGAPGGGVLAGGPRELAVWPAAAQRKRLLQLPQWRRRRPP
APRDDGEEAAWEEESPGLSGGPGGSGAGSTVAEAPPGTLALLLDEGSKQLPQAIIIGV
KKGGTRALLEFLRVHPDVRAVGAEPHFFDRSYDKGLAWYRDLMPRTLDGQITMEKTPS
YFVTREAPARISAMSKDTKLIVVVRDPVTRAISDYTQTLSKRPDIPTFESLTFKNRTA
GLIDTSWSAIQIGIYAKHLEHWLRHFPIRQMLFVSGERLISDPAGELGRVQDFLGLKR
IITDKHFYFNKTKGFPCLKKAEGSSRPHCLGKTKGRTHPEIDREVVRRLREFYRPFNL
KFYQMTGHDFGWDG"
BASE COUNT 247 a 489 c 471 g 206 t
ORIGIN
1 ggagccccgg ccgctgcctc ccgggacagt tcgcacggcc acaggggcgc acggcgatgt
61 ggcctccgtc cagcgcgctg gcccgccggg gggatgctct ggcacctgtc ggggtccagg
121 cctagcatgg ccggcacgtt gcccgacgtc gcctccggct aggatggccc ctccgggccc
181 ggccagtgcc ctctccacct cggccgagcc gctgtcccgc agcatcttcc ggaagttctt
241 gctgatgctc tgctccctgc tcacgtccct ttacgtcttc tactgcctgg ccgagcgctg
301 ccagaccctg tccggccccg tcgtggggct gtccggcggc ggcgaggagg cgggggcccc
361 tggtggcggc gtcctggccg gaggcccgag ggagctggcg gtgtggccgg cggcggcaca
421 gagaaagcgc ctcctgcaac tgccgcagtg gcggaggcgc cggccgcccg cgccccgcga
481 cgacggcgag gaggcggcct gggaagaaga gtcccctggc ctgtcagggg gtccgggcgg
541 ctccggggcc ggaagcaccg tggccgaggc cccgccgggg accctggcgc tgctcctgga
601 cgaaggcagc aagcagctgc cgcaggccat catcatcgga gtgaagaagg gcggcacgcg
661 ggcgctgctg gagttcctgc gcgtgcaccc cgacgtgcgc gccgtgggcg ccgagcccca
721 cttcttcgac cgcagctacg acaagggcct cgcctggtac cgggacctga tgcccagaac
781 cctggacggg cagatcacca tggagaagac gcccagttac ttcgtcacgc gggaggcccc
841 cgcgcgcatc tcggccatgt ccaaggacac caagctcatc gtggtggtgc gggacccggt
901 gaccagggcc atctcggact acacgcagac gctgtccaag cggcccgaca tccccacctt
961 cgagagcttg acgttcaaaa acaggacagc gggcctcatc gacacgtcgt ggagcgccat
1021 ccagatcggc atctacgcca agcacctgga gcactggctg cgccacttcc ccatccgcca
1081 gatgctcttc gtgagcggcg agcggctcat cagcgacccg gccggggagc tgggccgcgt
1141 gcaagacttc ctgggcctca agaggatcat cacggacaag cacttctact tcaacaagac
1201 caagggcttc ccctgcctga agaaggcgga gggcagcagc cggccccatt gcctgggcaa
1261 gaccaagggc aggacccatc ctgagatcga ccgcgaggtg gtgcgcaggc tgcgcgagtt
1321 ctaccggcct ttcaacctca agttctacca gatgaccggg cacgactttg gctgggatgg
1381 ataaccatat aatttaaaaa aaaaaaaaaa aaa
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