LOCUS BC044642 3092 bp mRNA linear HUM 16-AUG-2008 DEFINITION Homo sapiens ring finger and CCCH-type zinc finger domains 2, mRNA (cDNA clone IMAGE:5455191), complete cds. ACCESSION BC044642 VERSION BC044642.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3092) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3092) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (17-JAN-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 44 Row: j Column: 3 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 9256536 This clone has the following problem: The cds is short compared to the longest cds in the locus. FEATURES Location/Qualifiers source 1..3092 /db_xref="H-InvDB:HIT000052883" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:5455191" /tissue_type="Brain, astrocytoma, grade IV" /clone_lib="NIH_MGC_98" /lab_host="DH10B" /note="Vector: pOTB7" gene 1..3092 /gene="RC3H2" /gene_synonym="RNF164" /db_xref="GeneID:54542" /db_xref="HGNC:HGNC:21461" CDS 174..1694 /gene="RC3H2" /gene_synonym="RNF164" /codon_start=1 /product="RC3H2 protein" /protein_id="AAH44642.1" /db_xref="GeneID:54542" /db_xref="HGNC:HGNC:21461" /translation="MPVQAAQWTEFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNK LHRKACPFDQTAINTDIDVLPVNFALLQLVGAQVPDHQSIKLSNLGENKHYEVAKKCV EDLALYLKPLSGGKGVASLNQSALSRPMQRKLVTLVNCQLVEEEGRVRAMRAARSLGE RTVTELILQHQNPQQLSANLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKV LVLFVVQRLEPRFPQASKTSIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRSYEAL RREHDAQIVHIAMEAGLRISPEQWSSLLYGDLAHKSHMQSIIDKLQSPESFAKSVQEL TIVLQRTGDPANLNRLRPHLELLANIDPNPDAVSPTWEQLENAMVAVKTVVHGLVDFI QNYSRKGHETPQPQPNSKYKTSMCRDLRQQGGCPRGTNCTFAHSQEELEKCNPRGLYL HCCLLSSVASLGTVHNELYKQQHCDREKISVCAVKRAETCFSSQFFSPLEEPREED" BASE COUNT 914 a 660 c 647 g 871 t ORIGIN 1 ctccgccgag ctctgccccg gcgagacgag gcgcctccgt cgccaagccg cgccgtcgcg 61 gggctcccgg gagcggccct tagcgacccc gcccgggccc cctcagctta caaaacacta 121 cacagcaaaa taatgatctg ctagactgct aacccgagca tccagcttcc acaatgcctg 181 tgcaggcagc tcaatggaca gaatttctgt cctgtccaat ctgctataat gaatttgatg 241 agaatgtgca caaacccatc agtttaggtt gttcacacac tgtttgcaag acctgcttga 301 ataaacttca tcgaaaagct tgtccttttg accagactgc catcaacaca gatattgatg 361 tacttcctgt caacttcgca cttctccagt tagttggagc ccaggtacca gatcatcagt 421 caattaagtt aagtaatcta ggtgagaata aacactatga ggttgcaaag aaatgcgttg 481 aggatttggc actctactta aaaccactaa gtggaggtaa aggtgtagct agcttgaacc 541 agagtgcact gagccgtcca atgcaaagga aactggtgac acttgtaaat tgtcaactgg 601 tggaggaaga aggtcgtgta agagccatgc gagcagctcg ttcccttgga gaaagaactg 661 taacagaact gatattacag caccagaacc ctcagcagtt gtctgccaat ctatgggccg 721 ctgtcagggc tcgaggatgc cagtttttag ggccagctat gcaagaagag gccttgaagc 781 tggtgttact ggcattagaa gatggttctg ccctctcaag gaaagttctg gtactttttg 841 ttgtgcagag actagaacca agatttcctc aggcatcaaa aacaagtatt ggtcatgttg 901 tgcaactact gtatcgagct tcttgtttta aggttaccaa aagagatgaa gactcttccc 961 taatgcagct gaaggaggaa tttcggagtt atgaagcatt acgcagagaa catgatgccc 1021 aaattgttca tattgccatg gaagcaggac tccgtatttc acctgaacag tggtcctctc 1081 ttttgtatgg tgatttggct cataaatcac acatgcagtc tatcattgat aagctacagt 1141 ctccagagtc atttgcaaag agtgtccagg aattgacaat tgttttgcaa cgaacaggtg 1201 acccagctaa cttaaataga ctgaggcctc atttagagct tcttgcaaac atagacccta 1261 atccagacgc tgtttcacca acttgggagc agctggaaaa tgcaatggta gctgttaaaa 1321 cagtagttca tggccttgtg gacttcatac aaaattatag tagaaaaggc catgagaccc 1381 ctcagcctca gccaaacagc aaatacaaga ctagcatgtg ccgagatttg cgacagcaag 1441 ggggttgtcc acgaggaaca aattgtacat ttgcccattc tcaggaagag cttgaaaagt 1501 gtaacccccg tggactatat cttcattgtt gtctcctttc ctcagtggct agcttgggca 1561 ctgtacataa tgagctctac aagcagcagc attgtgatag agagaagata agtgtgtgtg 1621 cagtgaaaag agcagaaaca tgcttctctt ctcagttttt ttccccactt gaagagccta 1681 gagaagagga ttaaggagtc ctaaggaaaa aagatgctgt ttgtacccaa tcgaactagt 1741 tctatataca gaatttcaca tcaagataat ttgggagact ccaggaaata cattcagctt 1801 gtccatacct gaaatagagc tttttagcta aaaggggagc ttttgagaaa gttcgactaa 1861 aaaagtcaga gaagaaactg tggtttcatt gccattccac cctcaattag tgcccaggct 1921 gaaaatccat tttcttcttt ctcatacctt caaacagact tcacattctt catctgcagt 1981 acctagttca gaactttatt atattttgcc agacttgtaa tagtagcagt aaaaataata 2041 atagccaaac taggtgtagt ggctcatgcc tgtgttccca gcagtttggg aggcaaaggc 2101 aggaggatac cttgagtcca ggagtttgag accagcctgg gcaacatggt gagacctcac 2161 ctctacaaaa aaataaacaa aattggctga gcatagtggc atacgcctgt catcttagct 2221 actcaggagg ctgaggtggg aggattgctt gaactcggga ggtcaggtct gccgtgaact 2281 gagattatac cactgtattc caacccgggc agcagagcaa gactgtctca aaaatataaa 2341 taaataaaaa taataaaata ataaatatat aaaatatcac tcattcaaaa ataataataa 2401 tggcaaaatt attggtcaca tttttagtgt ttcacatggt aatccagttg gttttactgc 2461 ttcagtggct ttttatccag tatcttccta tatctcaatc tgtcttttcc atttccacta 2521 ttttcttttt aaaatatgtg tgtctccttt aaattcttaa ttagttcctc agtacatcac 2581 agaatctcat cctgatttta tcctctagct ctactctgcc atttgtatac tttgttttta 2641 aggtatattc aattaatcac tgttgattac tatataaatt tcttttactc ttcttttcac 2701 ttgtctatat tgtttattcc atattgtatt attttctctc tcctctttat ctggataact 2761 atttctaatc atactcagat attatcttcc ctccacagac ttccctaggc agtgttaatt 2821 gcatccttca ccatgctgcc atagcactcc atacatagta gtttaaaaat tatggtatag 2881 ttagctgggt gtggtggcaa gcacctgtgg tcccagctgc tcgggaggct gaggcgggag 2941 aatggcttga acttgggagg cagaggttgc agtgagccga gatggcgcca ctatactcct 3001 gtgtggacga cagagcaaga ttccgtctca aaaaataaat ataaataaat aaataaaaat 3061 tatggtatag ttataaaaaa aaaaaaaaaa aa //