LOCUS BC044634 1744 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens cytokine receptor-like factor 1, mRNA (cDNA clone
MGC:52126 IMAGE:5926400), complete cds.
ACCESSION BC044634
VERSION BC044634.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1744)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1744)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (17-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Lou Staudt
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 44 Row: o Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21361081.
FEATURES Location/Qualifiers
source 1..1744
/db_xref="H-InvDB:HIT000052880"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:52126 IMAGE:5926400"
/tissue_type="Lymph, lymphoma"
/clone_lib="NIH_MGC_99"
/lab_host="DH10B"
/note="Vector: pOTB7"
gene 1..1744
/gene="CRLF1"
/gene_synonym="CISS"
/gene_synonym="CISS1"
/gene_synonym="CLF"
/gene_synonym="CLF-1"
/gene_synonym="NR6"
/db_xref="GeneID:9244"
/db_xref="HGNC:HGNC:2364"
/db_xref="MIM:604237"
CDS 128..1396
/gene="CRLF1"
/gene_synonym="CISS"
/gene_synonym="CISS1"
/gene_synonym="CLF"
/gene_synonym="CLF-1"
/gene_synonym="NR6"
/codon_start=1
/product="cytokine receptor-like factor 1"
/protein_id="AAH44634.1"
/db_xref="GeneID:9244"
/db_xref="HGNC:HGNC:2364"
/db_xref="MIM:604237"
/translation="MPAGRRGPAAQSARRPPPLLPLLLLLCVLGAPRAGSGAHTAVIS
PQDPTLLIGSSLLATCSVHGDPPGATAEGLYWTLNGRRLPPELSRVLNASTLALALAN
LNGSRQRSGDNLVCHARDGSILAGSCLYVGLPPEKPVNISCWSKNMKDLTCRWTPGAH
GETFLHTNYSLKYKLRWYGQDNTCEEYHTVGPHSCHIPKDLALFTPYEIWVEATNRLG
SARSDVLTLDILDVVTTDPPPDVHVSRVGGLEDQLSVRWVSPPALKDFLFQAKYQIRY
RVEDSVDWKVVDDVSNQTSCRLAGLKPGTVYFVQVRCNPFGIYGSKKAGIWSEWSHPT
AASTPRSERPGPGGGACEPRGGEPSSGPVRRELKQFLGWLKKHAYCSNLSFRLYDQWR
AWMQKSHKTRNQDEGILPSGRRGTARGPAR"
BASE COUNT 314 a 627 c 528 g 275 t
ORIGIN
1 ccgcgtccgc gcccagcgac gtgcgggcgg cctggcccgc gccctcccgc gcccggcctg
61 cgtcccgcgc cctgcgccac cgccgccgag ccgcagcccg ccgcgcgccc ccggcagcgc
121 cggccccatg cccgccggcc gccggggccc cgccgcccaa tccgcgcggc ggccgccgcc
181 gttgctgccc ctgctgctgc tgctctgcgt cctcggggcg ccgcgagccg gatcaggagc
241 ccacacagct gtgatcagtc cccaggatcc cacgcttctc atcggctcct ccctgctggc
301 cacctgctca gtgcacggag acccaccagg agccaccgcc gagggcctct actggaccct
361 caacgggcgc cgcctgcccc ctgagctctc ccgtgtactc aacgcctcca ccttggctct
421 ggccctggcc aacctcaatg ggtccaggca gcggtcgggg gacaacctcg tgtgccacgc
481 ccgtgacggc agcatcctgg ctggctcctg cctctatgtt ggcctgcccc cagagaaacc
541 cgtcaacatc agctgctggt ccaagaacat gaaggacttg acctgccgct ggacgccagg
601 ggcccacggg gagaccttcc tccacaccaa ctactccctc aagtacaagc ttaggtggta
661 tggccaggac aacacatgtg aggagtacca cacagtgggg ccccactcct gccacatccc
721 caaggacctg gctctcttta cgccctatga gatctgggtg gaggccacca accgcctggg
781 ctctgcccgc tccgatgtac tcacgctgga tatcctggat gtggtgacca cggacccccc
841 gcccgacgtg cacgtgagcc gcgtcggggg cctggaggac cagctgagcg tgcgctgggt
901 gtcgccaccc gccctcaagg atttcctctt tcaagccaaa taccagatcc gctaccgagt
961 ggaggacagt gtggactgga aggtggtgga cgatgtgagc aaccagacct cctgccgcct
1021 ggccggcctg aaacccggca ccgtgtactt cgtgcaagtg cgctgcaacc cctttggcat
1081 ctatggctcc aagaaagccg ggatctggag tgagtggagc caccccacag ccgcctccac
1141 tccccgcagt gagcgcccgg gcccgggcgg cggggcgtgc gaaccgcggg gcggagagcc
1201 gagctcgggg ccggtgcggc gcgagctcaa gcagttcctg ggctggctca agaagcacgc
1261 gtactgctcc aatctcagct tccgcctcta cgaccagtgg cgagcctgga tgcagaagtc
1321 gcacaagacc cgcaaccagg acgaggggat cctgccctcg ggcagacggg gcacggcgag
1381 aggtcctgcc agataagctg taggggctca ggccaccctc cctgccacgt ggagacgcag
1441 aggccgaacc caaactgggg ccacctctgt accctcactt cagggcacct gagccaccct
1501 cagcaggagc tggggtggcc cctgagctcc aacggccata acagctctga ctcccacgtg
1561 aggccacctt tgggtgcacc ccagtgggtg tgtgtgtgtg tgtgagggtt ggttgagttg
1621 cctagaaccc ctgccagggc tgggggtgag aaggggagtc attactcccc attacctagg
1681 gcccctccaa aagagtcctt ttaaataaat gagctattta ggtgcaaaaa aaaaaaaaaa
1741 aaaa
//