LOCUS BC044627 2305 bp mRNA linear HUM 08-DEC-2006
DEFINITION Homo sapiens scribbled homolog (Drosophila), mRNA (cDNA clone
IMAGE:4588265), partial cds.
ACCESSION BC044627
VERSION BC044627.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2305)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2305)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (17-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 44 Row: e Column: 1.
FEATURES Location/Qualifiers
source 1..2305
/db_xref="H-InvDB:HIT000097899"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4588265"
/tissue_type="Kidney, renal cell adenocarcinoma"
/clone_lib="NIH_MGC_14"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..2305
/gene="SCRIB"
/gene_synonym="CRIB1"
/gene_synonym="SCRB1"
/gene_synonym="SCRIB1"
/gene_synonym="Vartul"
/db_xref="GeneID:23513"
/db_xref="HGNC:HGNC:30377"
/db_xref="MIM:607733"
CDS <1..2050
/gene="SCRIB"
/gene_synonym="CRIB1"
/gene_synonym="SCRB1"
/gene_synonym="SCRIB1"
/gene_synonym="Vartul"
/codon_start=2
/product="SCRIB protein"
/protein_id="AAH44627.1"
/db_xref="GeneID:23513"
/db_xref="HGNC:HGNC:30377"
/db_xref="MIM:607733"
/translation="KGVSFDQANNLLIEPARIEEEELTLTILRQTGGLGISIAGGKGS
TPYKGDDEGIFISRVSEEGPAARAGVRVGDKLLEVNGVALQGAEHHEAVEALRGAGTA
VQMRVWRERMVEPENAVTITPLRPEDDYSPRERRGGGLRLPLLPPESPGPLRQRHVAC
LARSERGLGFSIAGGKGSTPYRAGDAGIFVSRIAEGGAAHRAGTLQVGDRVLSINGVD
VTEARHDHAVSLLTAASPTIALLLEREAGGPLPPSPLPHSSPPTAAVATTSITTATPG
VPGLPSLAPSLLAAALEGPYPVEEIRLPRAGGPLGLSIVGGSDHSSHPFGVQEPGVFI
SKVLPRGLAARSGLRVGDRILAVNGQDVRDATHQEAVSALLRPCLELSLLVRRDPAPP
GLRELCIQKAPGERLGISIRGGARGHAGNPRDPTDEGIFISKVSPTGAAGRDGRLRVG
LRLLEVNQQSLLGLTHGEAVQLLRSVGDTLTVLVCDGFEASTDAALEVSPGVIANPFA
AGIGHRNSLESISSIDRELSPEGPGKEKELPGQTLHWGPEATEAAGRGLQPLKLDYRA
LAAVPSAGSVQRVPSGAAGGKMAESPCSPSGQQPPSPPSPDELPANVKQAYRAFAAVP
TSHPPEDAPAQPPTPGPAASPEQLSFRERQKYFELEVRVPQAEGPVRPGRRGLGPVPS
"
BASE COUNT 391 a 761 c 770 g 383 t
ORIGIN
1 caagggagtg tcgtttgacc aggccaataa cctgctgata gagcctgctc gcattgagga
61 ggaagagctg accctcacca tcctgcggca gactgggggc ctgggcatca gcattgcggg
121 cggcaagggc tccacaccct ataaggggga cgacgagggc atattcatct ctcgggtgtc
181 cgaggaaggc cctgcggccc gggctggagt ccgtgtgggt gacaagctcc tggaggtgaa
241 tggtgtggct ctgcagggcg ccgagcacca cgaggccgtg gaggcgctcc ggggggccgg
301 cactgccgtg cagatgcgag tgtggcggga gcgcatggtg gagcctgaga acgcggtcac
361 catcacgccg ctgcggcccg aggatgatta cagcccccga gagcggcggg gaggggggct
421 gcgcctgccc ctgctcccgc ctgagagccc cgggcccctc cgtcagcgcc acgtggcctg
481 cctggcacgc agcgagaggg ggctgggctt cagcattgct ggtgggaaag gctccacacc
541 ctacagggct ggtgatgcgg gcatcttcgt ctcccgcatt gccgagggcg gtgctgctca
601 ccgcgcgggc acactgcagg ttggcgaccg cgtcctctct attaatggag tggacgtgac
661 tgaggccagg catgaccacg ccgtctccct gctgaccgct gcctccccca ccatcgccct
721 gctgttggag cgggaggctg ggggccctct tcctcccagc cctctgccac attcctcacc
781 ccccaccgct gctgttgcca ccaccagcat aaccactgcc acccccgggg tgcctgggtt
841 gccgagcctg gcccccagcc tgctggctgc cgcgttggaa gggccatacc cagtggagga
901 gatccgtctg ccaagagctg ggggccctct ggggcttagt attgtcggag gctccgacca
961 ttccagccac ccgtttggtg tccaggagcc tggtgtgttc atctccaagg tgctcccgcg
1021 gggcctggcc gctcgcagcg gcctgcgggt tggggaccgc atcctggcag tgaacgggca
1081 agacgtgcgg gatgccacgc accaagaagc agtcagtgcc ctgctccggc cctgcctgga
1141 gctgtcgctg ctggtgcgga gggacccggc acccccgggc ctacgggaac tgtgcatcca
1201 gaaggcacct ggggagaggc tgggcatcag catccgcggg ggtgccaggg gccacgctgg
1261 caacccccgc gaccccacag acgagggcat cttcatctcc aaggtgagcc ccacgggggc
1321 agccgggcgc gacggtcggc tgcgtgtggg tttgcggctg ttggaggtga accagcagag
1381 cctgctgggc ctgacgcacg gcgaggcggt gcagctgctc cgcagtgtgg gcgacaccct
1441 caccgtgctg gtctgtgacg gcttcgaggc cagcaccgac gcagccctgg aggtgtcccc
1501 aggtgtcatt gccaacccct ttgcggcagg catcggccac cggaacagcc tggagagcat
1561 ctcttccatc gaccgggagc tgagccctga gggcccaggc aaggagaagg agctgcctgg
1621 acagaccctg cactgggggc ccgaggccac agaagccgca ggtcggggtc tgcagcccct
1681 gaagctggac taccgcgccc tggccgccgt gcccagcgct ggcagcgtgc agagggtacc
1741 gtctggagca gctggaggga agatggctga atctccctgc tcccctagtg gccagcagcc
1801 gccctccccg ccttctccgg atgagctgcc cgccaatgtg aagcaggcct acagggcctt
1861 cgcggccgtg cccacttctc acccgcctga ggatgcccct gcccagcccc ccacgcctgg
1921 gcctgcagcc tccccggagc agctgtcctt ccgggagcgg cagaagtact ttgagctgga
1981 ggtgcgcgtg ccccaggccg agggccccgt aaggcctggg cgccgtggcc tgggccctgt
2041 gccctcctag aggagcaggc acctccccca gacttggggt gggggccctg ccagctccag
2101 caccaccctt gccccaagtc ttttaacctg ggtgttagca ttttaaagag accccacagg
2161 agttctggcc tgtgactaac taactgcccc accccagccg agacctcggc gagactgtaa
2221 ctagtgatgt ttgtacaacc aaagactcta ttttgtggtt taaggagaat aaagttgact
2281 acattttaaa aaaaaaaaaa aaaaa
//