LOCUS BC044604 1488 bp mRNA linear HTC 12-JAN-2006
DEFINITION Homo sapiens chromosome 17 open reading frame 57, mRNA (cDNA clone
IMAGE:4817444), with apparent retained intron.
ACCESSION BC044604
VERSION BC044604.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1488)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1488)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (17-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 106 Row: c Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34222281
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..1488
/db_xref="H-InvDB:HIT000097879"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4817444"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
BASE COUNT 502 a 266 c 324 g 396 t
ORIGIN
1 agtcagcgcg gaggcggtat tgagttcagc cgctccccac agccccggag cccctgggcg
61 gtggcggtgg ccgcggcagc accggctcga cagccgatag ggtcctgggc ccgctccgct
121 cggggtggtc ggtgggcgga gcgtcgggct cggtcagaag tcgttggctt cgtaagagca
181 gggtctatgg gaagcctcct cagcgtgggt tcttggaaga ggtggagttt ggagaggctt
241 atgcggtacc tgattcatcc agcaaattaa gacctgccaa ctttttgata atctcgtcaa
301 taaattacag aacaattgtt cctttcaaga tttattcaaa acgtgtcaac tctgcttaat
361 taagcacttt gatgatttaa gaaatcttgg aaatcctttt gtactattgc tcattcatac
421 ttgttcatca aagcctggag tccttaagga cagaatttac ctctaaacag aaagatggaa
481 actaaagtac atttattctg ccagatgcct ccaccttttt ttgctagtat tgtgtcaaat
541 aagacaagtt ttttcaaata aaaacaaatc tggacttagt aagcagagac tttattcaaa
601 ataattattg caagagaaaa aagggactat tgaaattgga agaggaggag gactattgca
661 atggaaagaa tgctgtgacc gtaagatctg caggtgtctc aagggttggg cagaagtttt
721 cttttataga gagacgctgg aaagaaccag gcagaggaaa atattgactt attagatgat
781 ggctctaatt cttttgcaac tgacttgtca tcaggaacta ttaaccacaa gaaatacatc
841 aagttttcta aaacaataga gaaggaaatt tcaccggaaa ttaggagttt gagcccagaa
901 tataaaaaaa tatttgaaac atcaataatc ttttgtggag aagaaaagtc ctctgatttt
961 tcaggagaaa aaaaagttgg gagaaagagt ttacaagtac aacagcacag taaaagaact
1021 gagattatcc ctccttttct gaagctgtca aaggagaagg tgacaaggaa agaaaactct
1081 ttatgcaagt tgccgaatca gtacagcgtt cacaagactt catcacctct ttgtacatct
1141 tctgcaatta ctcgggaaaa ggaaatgctg tctaacctct acatgacatt atatgatgaa
1201 gtaacccatg gatatttaca ctcaaaagaa ttaagtggta accacatggt ggatattggg
1261 gatattatat ttactttgaa tgagctacag gaacagtatg aggatgtttc aattacagaa
1321 ggatcacctt tgaatgaaat tacttcagac agaaagttat caagtatagc aggatgctat
1381 ctaaaatata agaagaaaaa tagtttgtct tccaaactcc ctgaaccttc aatatccaaa
1441 aagttaaata aaaaaagcaa ccaatattat agcaaaaaaa aaaaaaaa
//