LOCUS BC044585 2184 bp mRNA linear HUM 21-JUL-2005
DEFINITION Homo sapiens ROD1 regulator of differentiation 1 (S. pombe), mRNA
(cDNA clone MGC:57192 IMAGE:5295452), complete cds.
ACCESSION BC044585
VERSION BC044585.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2184)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2184)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (17-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 106 Row: o Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38569465.
FEATURES Location/Qualifiers
source 1..2184
/db_xref="H-InvDB:HIT000052872"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:57192 IMAGE:5295452"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2184
/gene="ROD1"
/db_xref="GeneID:9991"
/db_xref="MIM:607527"
CDS 185..1861
/gene="ROD1"
/codon_start=1
/product="ROD1 protein"
/protein_id="AAH44585.1"
/db_xref="GeneID:9991"
/db_xref="MIM:607527"
/translation="MDASPSPFSLPKKLNELSARRGSDELLSSGIINGPFTMNSSTPS
TANGNDSKKFKRDRPPCSPSRVLHLRKIPCDVTEAEIISLGLPFGKVTNLLMLKGKSQ
AFLEMASEEAAVTMVNYYTPITPHLRSQPVYIQYSNHRELKTDNLPNQARAQAALQAV
SAVQSGSLALSGGPSNEGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKII
TFTKNNQFQALLQYADPVNAHYAKMALDGQNIYNACCTLRIDFSKLTSLNVKYNNDKS
RDFTRLDLPTGDGQPSLEPPMAAAFGAPGIISSPYAGAAGFAPAIGFPQATGLSVPAV
PGALGPLTITSSAVTGRMAIPGASGIPGNSVLLVTNLNPDLITPHGLFILFGVYGDVH
RVKIMFNKKENALVQMADANQAQLAMNHLSGQRLYGKVLRATLSKHQAVQLPREGQED
QGLTKDFSNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVTVDDLKNLFIEAGCSV
KAFKFFQKDRKMALIQLGSVEEAIQALIELHNHDLGENHHLRVSFSKSTI"
BASE COUNT 594 a 531 c 430 g 629 t
ORIGIN
1 tgaggtgggg cgagcggccg acggcgggtg cacgcgtcgg tacacgtctg ggcggcgacc
61 tggtcgcaag ccatggtccc acgcggggtc ccagggccgc cgcgggactt ggccgaggtc
121 tcccgacttg tgctgtgaga tacgttaacg ctttctcgac accaggggtc tggacttagt
181 gaccatggac gcttccccct cacctttctc tctccccaag aaacttaatg aattatctgc
241 ccgtcgggga tctgatgagc ttctttcttc tggcatcatt aacggacctt ttaccatgaa
301 tagttctact ccttctacag ctaatgggaa tgacagcaag aaatttaaac gagatagacc
361 tccctgttcg ccttcccgtg ttctccatct tcgaaaaatt ccatgtgatg tcaccgaagc
421 agagatcata tcattaggtc taccatttgg caaagtaact aatcttttga tgttgaaagg
481 aaaaagccag gctttcttag aaatggcttc tgaggaagct gccgttacta tggtgaatta
541 ttacactcct attactcctc accttcgaag ccagcctgtt tatattcagt attccaatca
601 cagagaactt aagactgaca atctacctaa tcaagctcga gcccaagctg cactgcaggc
661 tgtcagtgcc gtccaatcag gaagcctggc cctttctgga ggtccttcca atgaaggcac
721 agtcctacct gggcagagcc ctgtgcttcg aataattatt gaaaacctct tttaccctgt
781 taccctggaa gttcttcatc agatattttc taaatttggc acagtcttga agattatcac
841 ctttacaaag aataatcagt ttcaagcctt gcttcagtat gctgacccag taaatgcaca
901 ttatgccaaa atggctctgg atggccagaa tatctataat gcatgctgca ctctgcgcat
961 tgacttctcc aagctcacca gccttaatgt gaaatataat aatgacaaaa gcagagactt
1021 cactcgctta gaccttccta ctggtgatgg ccagccatcc cttgaacccc ctatggctgc
1081 tgcttttggt gcaccgggta taatttcttc accatatgca ggggctgctg gatttgcccc
1141 agccattgga tttcctcaag ctacaggtct atcagttcca gctgttcctg gagctcttgg
1201 tcctctcaca atcacctctt ctgctgtcac tggaaggatg gccattcctg gggctagtgg
1261 tataccagga aattctgttc tactcgtcac aaatctcaat cctgatctta tcacaccaca
1321 tgggcttttt atcctatttg gagtctatgg tgatgtacat cgagtgaaga ttatgtttaa
1381 taagaaagaa aatgccttgg ttcagatggc ggatgcaaat caagctcagc tagcaatgaa
1441 ccatctaagt ggtcagagac tttatgggaa agtgcttcgt gctacactgt ccaaacatca
1501 agcagtacag cttcctcgag agggacaaga agaccaaggt ctgactaagg atttcagcaa
1561 tagtcctttg catcgcttta aaaagccggg ctctaaaaac ttccagaata tctttccacc
1621 atcagccact ctgcatcttt ccaacattcc cccttctgtt acagtggatg atctgaagaa
1681 ccttttcata gaagctggat gttcagtgaa ggcttttaaa ttctttcaga aagatcgcaa
1741 aatggcgctc attcaattgg gatctgtgga agaagcaatt caggccctca ttgagcttca
1801 taaccatgac cttggagaaa atcaccacct cagagtttcc ttctcaaaat ctacaatctg
1861 acttttctgt gaatttttct cctaaaactg gaccataatt tcagtaaaac cttcagacat
1921 agactgaagc agctcaagac caattttgcc tctttcacaa aaataactct ttctgagttt
1981 gatattcaag tatattttaa aaatcaaggg tttttttttt tttgtattcc ccctgccccc
2041 gccagtcaaa ggtttctttt ccctttttac catggtttct acaaaaataa ccttcaggaa
2101 aaagaaaatc aggaaaaaaa ttttttttca ataatcttat tccctatatt aaattagatt
2161 tgaagaggaa aaaaaaaaaa aaaa
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