LOCUS BC044576 3075 bp mRNA linear HUM 11-APR-2007
DEFINITION Homo sapiens family with sequence similarity 108, member B1, mRNA
(cDNA clone MGC:57160 IMAGE:5285591), complete cds.
ACCESSION BC044576
VERSION BC044576.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3075)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3075)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (17-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 106 Row: n Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 71051599.
FEATURES Location/Qualifiers
source 1..3075
/db_xref="H-InvDB:HIT000052867"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:57160 IMAGE:5285591"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3075
/gene="FAM108B1"
/gene_synonym="CGI-67"
/gene_synonym="RP11-409O11.2"
/db_xref="GeneID:51104"
/db_xref="HGNC:HGNC:24278"
CDS 564..1430
/gene="FAM108B1"
/gene_synonym="CGI-67"
/gene_synonym="RP11-409O11.2"
/codon_start=1
/product="family with sequence similarity 108, member B1"
/protein_id="AAH44576.1"
/db_xref="GeneID:51104"
/db_xref="HGNC:HGNC:24278"
/translation="MNNLSFSELCCLFCCPPCPGKIASKLAFLPPDPTYTLMCDESGS
RWTLHLSERADWQYSSREKDAIECFMTRTSKGNRIACMFVRCSPNAKYTLLFSHGNAV
DLGQMSSFYIGLGSRINCNIFSYDYSGYGASSGKPTEKNLYADIEAAWLALRTRYGIR
PENVIIYGKSIGTVPSVDLAARYESAAVILHSPLTSGMRVAFPDTKKTYCFDAFPNID
KISKITSPVLIIHGTEDEVIDFSHGLALFERCQRPVEPLWVEGAGHNDVELYGQYLER
LKQFVSQELVNL"
BASE COUNT 857 a 615 c 678 g 925 t
ORIGIN
1 agtcggtggc caactcctgg ctcagtgggg attgtgctcg tcccctccgt tcccctccag
61 tcttcctccc gctaccggaa cgagcctcgc gcttggcagg ctgaggagga gcaaagaaag
121 caggattaaa gagaaggaag acctggctag gtctgggtgg cgtctgcagt gccagaaagg
181 gaggcggtgg cggcggcggc tgcgaccacg gccgcgcggg acgtgaggcc cgagagcaac
241 cgacgggcag cggcggccgc tccagcgccc cgcaccgggg ccgttagtca gcagaacgcg
301 agctcttgtg gaggagcagg gccggcgcga ggcgagactc gggagcgtga gcggggcccc
361 tggggcgccg ccgtccttct tcgccccggc gccgggggct gtagccctgg tccccgctcc
421 tctgtcgggc cagtctgcag gcggtgagag tcggacggcg cccggagcgc ggatctcgcc
481 ttgtggagga cagcgcgtcg gctgcggttc tctctcgacc ccttctgccc ggcgcttcgg
541 cccgggccgc tcaggtgcag agcatgaata atctttcatt tagtgagcta tgttgcctct
601 tctgctgtcc accttgtcca gggaagattg cttcaaaatt agcgtttttg ccacctgatc
661 caacttacac actgatgtgt gatgaaagcg gaagccgttg gactttacat ctgtctgaac
721 gagcagactg gcagtattct tctagagaaa aagatgctat tgagtgtttc atgactagaa
781 ccagtaaagg caacagaatt gcttgtatgt ttgtacgttg ttcacccaat gcgaaataca
841 ctttactctt ctcacatgga aatgctgttg atcttggtca aatgagcagc ttttacatag
901 gactaggatc acggattaat tgtaatatat tctcatatga ttattctgga tatggtgcca
961 gttccgggaa acccacagag aagaacctct atgcagacat tgaagctgct tggcttgctc
1021 ttaggacaag atatggcatt cgccctgaaa atgtgattat atatggcaaa agtataggga
1081 cagtaccatc tgtggatctt gctgctcgat atgagagtgc tgctgttatt cttcattctc
1141 ctctgacttc gggaatgcga gttgcctttc ctgataccaa gaagacctac tgttttgatg
1201 cattcccaaa cattgacaaa atctctaaga taacctctcc agtattaata attcatggga
1261 ctgaagatga agtcattgac ttttcacatg gcctcgcatt gtttgaacgt tgccaaagac
1321 ctgtggagcc tctctgggtt gaaggagcag gtcacaatga tgtggaactt tatggacagt
1381 atcttgaaag gttgaaacag tttgtgtcac aggaactggt aaatttgtaa aatattctgt
1441 aaatttgcta ctgggttttc ctttcttgct gaactgcact ctttggtaaa taacataaaa
1501 cctgaaggtt ttgtttgcaa atcatgtcag ttgccttcat aaatgtacag gtaatgattt
1561 gttaacagac ttaatgaaga ttttaattac cagaactaaa aactggaaat aacagtaccg
1621 tgcagtcagg ctgtgtaatt tatatttttt ctgtgaattt ttttttaaca tcaagatgag
1681 tactgtatga gattttaatt ctataaaatc aaatgctgta aaagtattgc caaatgcttt
1741 tgcatactag aaacaaattt ataaatattt ttaaaacatc tcaatatatt aaatcttatc
1801 ctggaataca actgtaatat tttgaaaaaa gctatgtatc taaagcaatt taagtactca
1861 taatggaatg aactgtaaaa gagatttaaa accatgcaag ttcactagaa ttaacctaaa
1921 ccctgttgta cagggataga ggtttaaagt tattttattg taaaatacat tgaattttct
1981 gtatactctg attacataca tttatccttt aaaaaagatg taaatcttaa tttttatgcc
2041 atctattaat ttaccaatga gttaccttgt aaatgagaag tcatgatagc actgaatttt
2101 aactagtttt gacttctaag tttggtactg tgaggcaagt acttaaaatt ttcatgctgg
2161 ttacttaaaa ggcatttaga gatttcaaga atgattttgt atacgatgtt ttaaattttg
2221 actgatctca tagtcttcat agaattgcag tagtcttcat tgtatgaaat cccgaaagtc
2281 catgagttga tcttaaagac cactaacaga ctggctatca gatccctttt cactttggct
2341 atttttttca ttttttgaga tggagtcttg ctgtgtcact gaggctggag tgcagtggcg
2401 cgatcttgac tcactgcaac ctctgcctcc caggatcaag tgattctcct gcctcagcct
2461 cctgagtagc tggtattaca gatgcttgcc accacgcctg gctaattttt gtatttttag
2521 tagagacagg gttttgccat gttgatcagg ctggtcttga actcctgacc tcatgatctg
2581 cccttggcct cccaaagtgt cggaattaca ggcatgagcc actgcgcctg gcccacttta
2641 gctattttta aaaataggac ctattgtttt ggattactat ctgagaattt catggattca
2701 ctcctgggta taggagataa gaatacgttt aattcataac ttttatatta accaatatag
2761 taaaaaaata aagctcacac atacaaaaac taagttgcct ttccttgaat gaaccctgtc
2821 tgaataaaac aatgaaaaat aaaaataaaa ttaatggtat gtagtctaat ttgtaaatga
2881 atgaatatgg aaataataca cactgtggat atattttaag gccttatgta gttttaattg
2941 ttctgctcgt tccgtggtta tgtttaagac tatagtatat gactctcttc aaagtatatc
3001 aagtattgtg aatgctttgg ttcagatgtg tcaaattaac agtaaaacaa caaatatacc
3061 aaaaaaaaaa aaaaa
//