LOCUS BC044255 2708 bp mRNA linear HUM 13-JAN-2004
DEFINITION Homo sapiens nucleoporin 205kDa, mRNA (cDNA clone IMAGE:6050039),
partial cds.
ACCESSION BC044255
VERSION BC044255.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2708)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2708)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (13-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steven Jones, Jennifer Asano, Ian Bosdet, Yaron Butterfield,
Susanna Chan, Readman Chiu, Chris Fjell, Erin Garland, Ran Guin,
Letticia Hsiao, Martin Krzywinski, Reta Kutsche, Oliver Lee, Soo
Sen Lee, Victor Ling, Carrie Mathewson, Candice McLeavy, Steven
Ness, Pawan Pandoh, Anna-Liisa Prabhu, Parvaneh Saeedi, Jacqueline
Schein, Duane Smailus, Michael Smith, Lorraine Spence, Jeff Stott,
Michael Thorne, Miranada Tsai, Natasja van den Bosch, Jill Vardy,
George Yang, Scott Zuyderduyn, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 89 Row: m Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..2708
/db_xref="H-InvDB:HIT000097845"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6050039"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..2708
/gene="NUP205"
/gene_synonym="C7orf14"
/gene_synonym="KIAA0225"
/db_xref="GeneID:23165"
CDS <1..2500
/gene="NUP205"
/gene_synonym="C7orf14"
/gene_synonym="KIAA0225"
/codon_start=2
/product="NUP205 protein"
/protein_id="AAH44255.1"
/db_xref="GeneID:23165"
/translation="KILNILDSIDFSQEIPEPLQLDFFDRAQIEQVIANCEHKNLRGQ
TVCNVKLLHRVLVAEVNALQGMAAIGQRPLLMEEISTVLQYVVGRNKLLQCLHAKRHA
LESWRQLVEIILTACPQDLIQAEDRQLIIRDILQDVHDKILDDEAAQELMPVVAGAVF
TLTAHLSQAVLTEQKQTSVLGPAEAHYAFMLDSCFTSPPPEENPLVGFASIGDSSLYI
ILKKLLDFILKTGGGFQRVRTHLYGSLLYYLQIAQRPDEPDTLEAAKKTMWERLTAPE
DVFSKLQRENIAIIESYGAALMEVVCRDACDGHEIGRMLALALLDRIVSVDKQQQWLL
YLSNSGYLKVLVDSLVEDDRTLQSLLTPQPPLLKALYTYESKMAFLTRVAKIQQGALE
LLRSGVIVRLAQCQVYDMRPETDPQSMFGMRDPPMFIPTPVDRYRQILLPALQLCQVI
LTSSMAQHLQAAGQVLQFLISHSDTIQAILRCQDVSAGSLQELALLTGIISKAALPGI
LSELDVDVNEGSLMELQGHIGRFQRQCLGLLSRFGGSDRLRQFKFQDDNVEGDKVSKK
DEIELAMQQICANVMEYCQSLMLQSSPTFQHAVCLFTPSLSETVNRDGPRQDTQAPVV
PYWRLPGLGIIIYLLKQSANDFFSYYDSHRQSVSKLQNVEQLPPDEIKELCQSVMPAG
VDKISTAQKYVLARRRLVKVINNRAKLLSLCSFIIETCLFILWRHLEYYLLHCMPTDS
QDSLFASRTLFKSRRLQDSFASETNLDFRSGLAIVSQHDLDQLQADAINAFGESLQKK
LLDIEGLYSKVRSRYSFIQALVRRIRGLLRISRN"
BASE COUNT 759 a 579 c 607 g 763 t
ORIGIN
1 aaaaattcta aatattcttg actcgattga cttcagtcag gagatccctg agcctttgca
61 gttggatttt tttgatcggg cccagattga acaagttatt gctaactgtg aacacaagaa
121 tttacgggga cagacagtct gcaatgtcaa gcttcttcat agggttcttg tagctgaagt
181 aaatgccctt cagggtatgg cagccatagg acagagacct ctactaatgg aggaaatcag
241 cactgtactt cagtatgtgg taggaagaaa taaattgctg cagtgtcttc atgcaaaacg
301 tcatgctctg gagtcgtgga ggcaactagt agaaattata ctgacagctt gtccccagga
361 cctcattcag gcagaggatc gacaactgat tattcgtgat attttacaag atgtgcatga
421 taagatactg gatgatgaag ctgcgcaaga gttaatgcct gtggtcgctg gggcagtgtt
481 cacactgact gctcacctaa gccaggccgt cctcactgaa cagaagcaaa catcagtctt
541 gggaccagca gaggcccatt acgcttttat gcttgatagt tgcttcacct cacctcctcc
601 tgaagagaac ccattagtgg gttttgcttc tattggagat tcttcacttt acatcatatt
661 gaagaaactg ttagacttca ttttgaagac aggtggtgga ttccaacgag tgaggactca
721 cttgtatggc tctctgcttt attacttaca gattgcccag agacctgatg aaccagacac
781 cttagaagca gccaagaaaa ccatgtggga aaggctgaca gcccctgaag atgtatttag
841 caaattacag cgagaaaaca tagccattat tgaaagttat ggcgccgccc tcatggaagt
901 ggtctgtcga gatgcttgtg atggtcatga gattggaagg atgctggccc tggctctact
961 tgatagaatt gtctccgtgg ataaacagca gcagtggctt ttgtatcttt ctaacagtgg
1021 ctacttgaag gtcctcgtag acagcttggt agaagatgac cgtactttgc agagcttact
1081 caccccacag cctccccttt taaaagcact ttatacttat gaatctaaaa tggcatttct
1141 cacaagagtg gcaaagatac agcagggtgc attagagctg ctaagatcag gggtgattgt
1201 gagactagct caatgccaag tctatgacat gcgcccagaa acggacccgc agagcatgtt
1261 tggcatgaga gaccctccaa tgttcatccc taccccagtg gatcgctacc gccagattct
1321 cctcccagct ctccagctgt gccaggtcat cctcacatct agtatggccc agcacttgca
1381 ggcagcaggg caggtattgc agtttcttat ttcacattct gataccatac aagcaattct
1441 gcgctgtcag gatgttagtg ctgggtcttt gcaggaattg gctctgctga caggaattat
1501 aagtaaagca gcacttcctg gaatattaag tgaacttgac gttgatgtaa atgaagggtc
1561 tctaatggag ctacagggac atattggaag attccagcgc cagtgcttag gactactaag
1621 tcgctttggt ggctctgaca gactgcgtca gtttaaattt caagacgata atgtggaggg
1681 agataaagta agcaagaaag atgagattga actggctatg cagcagattt gtgccaatgt
1741 aatggaatat tgccagtcac tcatgttaca gagttcccct accttccagc atgctgtgtg
1801 tctcttcact cctagccttt cagaaacagt taatagagat ggaccgcggc aagataccca
1861 agctccagtg gttccatact ggcgcctgcc tggtttaggc attatcatct acctgctgaa
1921 acagagtgct aatgatttct tcagctatta tgacagtcat cgacagagtg tcagcaagct
1981 acaaaatgta gagcagcttc ccccagatga gataaaagag ttgtgtcagt ctgtgatgcc
2041 tgctggtgtt gataaaatct ccactgccca gaaatatgtt ctagcaagac ggcgcttggt
2101 gaaggtgatc aacaatcgag ctaaactgct ttccctttgt tcttttatca tagagacctg
2161 cctatttatt ctttggcgcc atctggagta ctacttgtta cattgcatgc ccacggattc
2221 tcaagattcc ttatttgcct cgagaacctt gtttaaaagc agaagactgc aagattcctt
2281 cgcctcagaa accaatctag attttagaag tgggctggct atagtgagcc aacatgattt
2341 agaccagctt caggctgatg caatcaatgc ttttggagaa tcactacaaa agaaacttct
2401 ggacattgaa ggattatatt caaaagttcg atctcgatat agtttcatac aggctcttgt
2461 cagacgtatc cgtggcctct tgaggatatc aaggaactga gagcccgtgc ttatgctctt
2521 ctatgagaga gatgaattgg ggagaattgt ctccatttta tagattagtt tctttctaaa
2581 ttatgaccaa aaatattttg ctatttcttt ctttgtatat ggacatcttt tctgtaaact
2641 tcttccccta gttccatcct cactagtaaa aaataaatac tttttaaaaa aacaaaaaaa
2701 aaaaaaaa
//