LOCUS BC044246 3120 bp mRNA linear HUM 09-JUN-2008
DEFINITION Homo sapiens transmembrane protein 200A, mRNA (cDNA clone MGC:50847
IMAGE:5760073), complete cds.
ACCESSION BC044246
VERSION BC044246.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3120)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3120)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (13-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 89 Row: i Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40538800.
FEATURES Location/Qualifiers
source 1..3120
/db_xref="H-InvDB:HIT000052860"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:50847 IMAGE:5760073"
/tissue_type="Colon, Kidney, Stomach, adult, whole pooled"
/clone_lib="NIH_MGC_116"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3120
/gene="TMEM200A"
/gene_synonym="TTMA"
/gene_synonym="TTMC"
/db_xref="GeneID:114801"
/db_xref="HGNC:HGNC:21075"
CDS 144..1619
/gene="TMEM200A"
/gene_synonym="TTMA"
/gene_synonym="TTMC"
/codon_start=1
/product="TMEM200A protein"
/protein_id="AAH44246.1"
/db_xref="GeneID:114801"
/db_xref="HGNC:HGNC:21075"
/translation="MIATGGVITGLAALKRQDSARSQQHVNLSPSPATQEKKPIRRRP
RADVVVVRGKIRLYSPSGFFLILGVLISIIGIAMAVLGYWPQKEHFIDAETTLSTNET
QVIRNEGGVVVRFFEQHLHSDKMKMLGPFTMGIGIFIFICANAILHENRDKETKIIHM
RDIYSTVIDIHTLRIKEQRQMNGMYTGLMGETEVKQNGSSCASRLAANTIASFSGFRS
SFRMDSSVEEDELMLNEGKSSGHLMPPLLSDSSVSVFGLYPPPSKTTDDKTSGSKKCE
TKSIVSSSISAFTLPVIKLNNCVIDEPSIDNITEDADNLKSRSRNLSMDSLVVPLPNT
SESFQPVSTVLPRNNSIGESLSSQYKSSMALGPGAGQLLSPGAARRQFGSNTSLHLLS
SHSKSLDLDRGPSTLTVQAEQRKHPSWPRLDRNNSKGYMKLENKEDPMDRLLVPQVAI
KKDFTNKEKLLMISRSHNNLSFEHDEFLSNNLKRGTSETRF"
BASE COUNT 951 a 587 c 627 g 955 t
ORIGIN
1 gtgagaccag gactgagaac agggagaggc gacccgaccc ccagggcccg gtgctcagga
61 cagcacacag agccgctgaa aacgactgaa gagagcaagg gatttcctgg gacatctggc
121 tctggagagt aaaaggccaa gctatgatag caactggtgg agtgataact ggcctggccg
181 ccttgaaaag gcaagactct gccagatcac agcagcatgt caacctcagc ccgtctcctg
241 ctacccaaga gaagaagccc atcaggcgcc ggccccgggc agatgttgtg gttgttcgtg
301 gcaaaatccg gctttattcc ccatctggtt tttttcttat tttaggagtg ctcatctcca
361 ttataggaat tgccatggcc gttcttggat attggcccca aaaagaacat tttattgatg
421 ctgaaacaac actgtcaaca aatgaaactc aggtcattcg gaatgaaggc ggtgtggtgg
481 ttcgcttctt tgagcagcat ttgcattctg ataagatgaa aatgcttggc ccgttcacca
541 tggggattgg cattttcatt ttcatttgtg ctaatgccat tcttcatgaa aaccgtgaca
601 aagagaccaa aatcatacac atgagggata tctattccac agtcattgac attcacacgc
661 taagaatcaa ggagcaaagg caaatgaacg gcatgtacac tggtttgatg ggagaaacag
721 aagtaaaaca gaatgggagc tcctgtgcct cgagattggc agcaaatacg atcgcctctt
781 tctcgggttt tcggagcagt tttcgaatgg acagctccgt ggaggaggat gaacttatgt
841 taaatgaagg taagagttct gggcatctta tgcccccttt gctctctgac agctctgtgt
901 ctgtctttgg cctctatcca cctccttcca agacaactga tgataagacc agcggctcta
961 agaaatgtga aaccaagtca attgtgtcat cgtccatcag tgcttttaca ttgcctgtga
1021 tcaaacttaa taactgtgtt attgatgagc ccagtataga taacatcact gaagatgctg
1081 acaacctcaa aagtaggtca aggaatttgt caatggattc ccttgtggtt cctttgccca
1141 acaccagtga atccttccag cccgtcagca cagtgctacc aaggaataat tccattgggg
1201 agtcgttgtc gagtcagtac aagtcatcta tggctctcgg acctggggct ggacagctct
1261 tgtctcctgg ggctgccaga agacagtttg ggtccaatac atccttgcat ttgctctcgt
1321 cacactcaaa gtccttggac ttagaccggg gtccctccac tctaactgtt caggcagaac
1381 aacggaaaca tccaagttgg cctaggttgg atcggaacaa cagcaaggga tatatgaaac
1441 tagagaacaa agaagacccg atggataggt tgcttgtgcc ccaagttgcc atcaaaaagg
1501 actttaccaa taaggagaag cttcttatga tttcaagatc tcacaataat ttgagttttg
1561 aacatgatga gtttttgagt aacaacctaa agaggggaac ttctgaaaca aggttttaat
1621 gttaaaagaa tatatcattt tacaagggta tatattttaa aacgattttc actggtgttt
1681 ccttcttaaa gtattggctg taagcctttt taatcaaatg gtttgtagtg tattagaatt
1741 ggctgcttag ttctgtaatg aagatggttg tatgtttggg ttacttgtga ctgcagtact
1801 ctatgttacc acacatgatt ttatttttct cttcctttga aagcatgatc tcttttatta
1861 atatgaatgc aaaatgcttg catccaaatt aaagcttatt ttctttactt ttaagttctt
1921 tgattgccct attcataaaa tgaaatgtcc agtatggaaa acatagggta ccaaagtgtg
1981 gaccaggagt acaaattcag tcccaatact caatacgtat tatagatgac tatgagtgca
2041 aaccttagga tgtgattttc tgaataattg ttctttgtag gatttggtta cattatttaa
2101 aatgaaaaag atctagtttt agtgtgagct cagtaatgtt aattggttaa gttcattgtg
2161 aatcttgagt tttagataag tagttatttt tttcaatatc acttctgttt ttagtgatat
2221 tatatcaaga aacaacgtat tcaagagcca tggctgacag tgccagatat acttagggat
2281 aaacatcaaa atgcaattat agttgctata acgttagata ctcggaatca aaatttattt
2341 gcaagctgac ttgataaact aaatgaacca ataaaatttg tagaaatgct atcctgaaat
2401 aattatatac atgaagacaa tgttgactaa tgaattaaga tacattatat actagttaat
2461 gctaactagt ctcagtacct gtttttagcc atctgttact gtccaatagc acctcattcc
2521 cacattctat tttcccccgg tattctttag atcctagtat ttggaaaaca atcggctaac
2581 cttgacattt ctttttacct tcatatgcca ctatctcggt agttcaaaaa aatttaaatt
2641 cttgataaat tgccttgaag tttaccttgt gctggagagc cttatgataa ctccaaagac
2701 tttcttacgg tataatacat gttgtttagg attgtgtttc ttagtcactg aagataataa
2761 atattaaaat ggatgttttc atcagaaaat tttcatgttt tcctttaagg taacataatt
2821 gtaagaattg tttaataaaa tactcaggaa attctaaagg tttctcctaa tacctaaaca
2881 tttctgaaca tcagtattgc agttgtggaa gagcagaagg aggatacatt tgtttgtgtt
2941 gctccccaaa attccacctt gcatttgcat cacaaacttc cctcaattga ggcagttttc
3001 tttgttagaa cattaagtct gtgtattgta atagagtggg ctcaatattt tactataaag
3061 catttaataa actgttatta atagaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//