LOCUS BC044212 1741 bp mRNA linear HUM 27-OCT-2006
DEFINITION Homo sapiens VGF nerve growth factor inducible, mRNA (cDNA clone
MGC:49836 IMAGE:5753268), complete cds.
ACCESSION BC044212
VERSION BC044212.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1741)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1741)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (13-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 89 Row: h Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 17136077.
FEATURES Location/Qualifiers
source 1..1741
/db_xref="H-InvDB:HIT000097817"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:49836 IMAGE:5753268"
/tissue_type="Brain, Lung, Testis, adult, pooled whole"
/clone_lib="NIH_MGC_115"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1741
/gene="VGF"
/db_xref="GeneID:7425"
/db_xref="HGNC:HGNC:12684"
/db_xref="MIM:602186"
CDS 206..1339
/gene="VGF"
/codon_start=1
/product="VGF protein"
/protein_id="AAH44212.1"
/db_xref="GeneID:7425"
/db_xref="HGNC:HGNC:12684"
/db_xref="MIM:602186"
/translation="MKALRLSASALFCLLLINGLGAAPPGRPEAQPPPLSSEHKEPVA
GDAVPGPKDGSAPEVRGARNSEPQDEGELFQGVDPRALAAVLLQALDRPASPPAPSGS
QQGPEEEAAEALLTETVRSQTHSLPAPESPEPAAPPRPQTPENGPEASDPSEELEALA
SLLQELRDFSPSSAKRQQETAAAETETRTHTLTRVNLESPGPERVWRASWGEFQARVP
ERAPLPPPAPSQFQARMPDSGPLPETHKFGEGVSSPKTHLGEALAPLSKAYQGVAAPF
PKARRPESALLGGSEAGERLLQQGLAQVEAGRRQAEATRQAAAQEERLADLASDLLLQ
FAAGRGPAARPCPLALPLSPGCVGTCQTPLPGPEPELPELTRG"
BASE COUNT 385 a 603 c 513 g 240 t
ORIGIN
1 gccggagcga gctagccgcc cggagccgcg ccgacccagc tgagcccagc ccacgggacg
61 ccagacctcg accgtcgctc ctaccccggc caccgctcgg agccgaggcg gacgcgtccc
121 gatcttcccc tgtccccacc ctgccccgac cctcctctcc acctctcgcg tcgtgacacc
181 agctgtctcc ggcagcctct tggtcatgaa agccctcaga ttgtcggctt ccgccctctt
241 ctgccttctg ctgatcaacg ggttaggggc agcaccccct ggtcgccctg aggcgcagcc
301 tcctcctctc agctctgagc ataaagagcc ggtagccggg gacgcagtgc ccgggccaaa
361 ggatggcagc gccccagagg tccgaggcgc tcggaattcc gagccgcagg acgagggaga
421 gcttttccag ggcgtggatc cccgggcgct ggccgcggtg ctgctgcagg cactcgaccg
481 tcccgcctca cccccggcac caagcggctc ccagcagggg ccggaggaag aagcagctga
541 agctctgctg accgagaccg tgcgcagcca gacccacagc ctcccggcgc cggagagccc
601 ggagcccgcg gctccgcctc gccctcagac tccggagaat gggcccgagg cgagcgatcc
661 ctccgaggag ctcgaggcgc tagcgtccct gctccaggaa ctgcgagatt tcagtccaag
721 tagcgccaag cgccagcagg agacggcggc agcagagacg gaaacccgca cgcacacgct
781 gacccgagtg aatctggaga gcccggggcc agagcgcgta tggcgcgctt cctggggaga
841 gttccaggcg cgtgtcccgg agcgcgcgcc cctgccgccc ccggccccct ctcaattcca
901 ggcgcgtatg cccgacagcg ggccccttcc cgaaacccac aagttcgggg aaggagtgtc
961 ctcccccaaa acacacctag gcgaggcatt ggcacccctg tccaaggcgt accaaggcgt
1021 ggccgccccg ttccccaagg cgcgccggcc ggagagcgca ctcctgggcg gctccgaggc
1081 gggcgagcgc cttctccagc aagggctggc gcaggtggag gccgggcggc ggcaggcgga
1141 ggccacgcgg caggccgcgg cgcaggaaga gcggctggcc gacctcgcct cggacctgct
1201 gctccagttt gctgcagggc ggggcccggc agcgcggccc tgccccttgg ccctgcccct
1261 gtccccgggc tgcgtcggga cctgccagac ccccctcccg ggtcctgagc ccgaactccc
1321 agagctcacc cgcgggtgac cgggggccag cccaggaggg cgggtggttt gtgcgagttc
1381 ccttgccacg cggggccccg gccccatcaa gtccctctgg ggacgtcccc gtcggaaacc
1441 ggaaaaagca gttccagtta attgtgtgaa gtgtgtctgt ctccagccct tcgggcctcc
1501 cacgagcccc tccagcctct ccaagtcgct gtgaattgac cccttctttc ctttctctgt
1561 tgtaaatacc cctcacggag gaaatagttt tgctaagaaa taaaagtgac tattttatta
1621 ggaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1681 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1741 a
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