LOCUS BC043489 1918 bp mRNA linear HTC 19-NOV-2003
DEFINITION Homo sapiens colipase, pancreatic, mRNA (cDNA clone IMAGE:5202155),
with apparent retained intron.
ACCESSION BC043489
VERSION BC043489.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1918)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1918)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (09-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steven Jones, Jennifer Asano, Ian Bosdet, Yaron Butterfield,
Susanna Chan, Readman Chiu, Chris Fjell, Erin Garland, Ran Guin,
Letticia Hsiao, Martin Krzywinski, Reta Kutsche, Oliver Lee, Soo
Sen Lee, Victor Ling, Carrie Mathewson, Candice McLeavy, Steven
Ness, Pawan Pandoh, Anna-Liisa Prabhu, Parvaneh Saeedi, Jacqueline
Schein, Duane Smailus, Michael Smith, Lorraine Spence, Jeff Stott,
Michael Thorne, Miranada Tsai, Natasja van den Bosch, Jill Vardy,
George Yang, Scott Zuyderduyn, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 89 Row: b Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 11496883
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..1918
/db_xref="H-InvDB:HIT000097696"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5202155"
/tissue_type="Lung, Spleen, fetal, pooled"
/clone_lib="NIH_MGC_122"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 431 a 536 c 504 g 447 t
ORIGIN
1 cccacaccag ctgtcccact caccatggag aagatcctga tcctcctgct tgtcgccctc
61 tctgtggcct atgcagctcc tggcccccgg gggatcatta tcaacctggt aagagggtct
121 tcaggggagg cgcctcctga gtccccagat gaagacttcc taagcttgga ccttgacctc
181 tgatgtctcc acctggactg gcaggggctg ggaggagtgg catcttgcat ccctctgttt
241 acttccatgt cctgtcctat gcctcttccc agaggccaca ggaaaggctg atcagcccct
301 ctccagctcc aactggagca tgctcagagc agcagctcaa cctggctatg agggaccttt
361 tttttctttt ttttcttttt gaaacggagt cttgctctgt caccaggctg gagtgtagtg
421 gcacaatctc ggctcactgc aatctctgct tcccgggttc aaatgattct cctgcctcag
481 cctcccaaga agctgggatt acaggtgcct gccataacgc tcagctattt ttttgtattt
541 ttagtagaaa tagggtttca ccatgttgcc caggctagtc tcaaactcct gacctcgtga
601 tccgcccacc tcggcctccc aaagtgctgg gattacaggc atgagccacc tcacctggcc
661 ctacgaggga gctttgtaaa aatccagagc cctgggcttc catcctgaga aaatgctttg
721 cgccaatcat tccagcttct gacttatgga gatgcctcgg agatgtttac tcattctgtt
781 ctcataataa ccactgaggg aggtgttttc agagtcagcc ctgtcttcag acagagagag
841 ggtgagcaac ctgcctgagg tcacatagct ggaaagtggt tcagctgggg ccccaccact
901 gccccacacc acctctccac catgggtctt ggctgggaaa gcccttccag aacgtccatg
961 cggttgaaag gttctgaact ctcttaactt ggggccatgg ctggacttgg aggtccagga
1021 cccttggaga ttatagatca gatctgttgg gggaggaagg agtcttgcag ggagatgcaa
1081 tcttcaccgc ctccttaaag aggtgtggga cccagagtgg tttggagaac ttgtctaggg
1141 gccttgtgtg cacattccaa atgggaacac tgaggcttgg gaggcagtga cttgcccaga
1201 gtcacacagg aggttggtag cacagccggt actagaaccc aggggtcctg accctctgtg
1261 caagtctgct tctctgtcac cgcatgccca cttctcacgt gggtgggggg cacagaggcc
1321 accagaccca ggggatggac tccttcacac acatccctac caggggagac actgttagtg
1381 gtagtgtgtg gtgggtacag gtctgaatgg agaagggacc tgagggagtg gggcctgggc
1441 tgactggctg ctcctggcag gagaacggtg agctctgcat gaatagtgcc cagtgtaaga
1501 gcaattgctg ccagcattca agtgcgctgg gcctggcccg ctgcacatcc atggccagcg
1561 agaacagcga gtgctctgtc aagacgctct atgggattta ctacaagtgt ccctgtgagc
1621 gtggcctgac ttgtgaggga gacaagacca tcgtgggctc catcaccaac accaactttg
1681 gcatctgcca tgacgctgga cgctccaagc agtgagactg cccacccact cccacaccta
1741 gcccagaatg ctgtaggcca ctaggcgcag gggcatctct cccctgctcc agcgcatctc
1801 ccgggctggc cacctccttg accagcatat ctgttttctg attgcgctct tcacaattaa
1861 aggcctcctg caaaccttaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaa
//