LOCUS BC043435 1550 bp mRNA linear HTC 27-OCT-2008
DEFINITION Homo sapiens cDNA clone IMAGE:5296336, with apparent retained
intron.
ACCESSION BC043435
VERSION BC043435.2
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1550)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1550)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC043435.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 76 Row: l Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 61966882
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..1550
/db_xref="H-InvDB:HIT000097685"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5296336"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
BASE COUNT 358 a 492 c 359 g 341 t
ORIGIN
1 aggtgcctga ggacagcagt gcagttgaca tggatattct ctttcctctg gacagtgtta
61 ttggtacaga gctgtgcccc agccccattc cccagatcat ccatttcgtc ctctttgttg
121 tgttcagcct ggtgatcctg attatcttac gcctctacat tcccagggag ccgtcctcag
181 tgcctcccag agaggaggac agcgagaatg atcaagctga agtgggggaa tggctcagga
241 tcggaaataa atatatcact ttgaaagatt acagaattct cttgaaagaa ctggagaacc
301 ttgagatcta cactttcctg tcgaaaaagt gcctgaagaa gctctctagg gagggcagct
361 cccatcacct tccacgccaa gtccgcccag ggccagtgta caaaccagca cctgctagga
421 accaccggcc acgtgggggg cgtgggaaag cttctcccac cagcttccat gtgtccccac
481 gggctcccct ggctcctctg gcctccatgc cgtcatcagt cccgaagacc tccgtagagt
541 ccttggggtc tccatcatcc ctgagctcct ccaagccacg agagcctctg tgtcccctga
601 agcacccttc acaccagcca cctgcgagca ccctatcacc aaacccgacc agctccacag
661 aatccttggg gtatctgtca tccctgagct cctcccagcc accagagcct ttgcgtcccc
721 tgaagcaccc ttcacacaag ccacgtgggc gttcccttcc ccgacgacgg aatcctggct
781 gggtgtcctg gtccgactcc atgcaggctg attccgaaac tgacaccata atatgcccaa
841 tgtgcaaggc ccctgagcgc tcctgtccac acacctggtg ggtgccttct agccctcgag
901 tgatccgagg cgttggtcgc tgcagtgatc ccaacctggg cctctcctgg aggcaggagg
961 ctgctagagc ctggtgccac tgcacctctt cacagttccc attcaagcac cctaatcttc
1021 ccacccacct accaaaggct tccttctagg gagaccccac atgcaggcag gtggaggcag
1081 gggtcccgct ttcctcagcc tggatgtgcc aacgctgctg gacgcataag acaccaaaat
1141 cccagacact cccatggaca ccgaatatcc gacatccacg aacaattggg aatctcctga
1201 ggacaacttg gagatggagt ctcactctgt tgctcaggct ggagtgcagt ggcaccatct
1261 tggctcacca caacctccgc ctcccggatt caagccattc tcctgcctca gcctcctgag
1321 taactgggat tacaggcttg tgccaccgca cccagctaat ttttgtaatt ttagtcgaga
1381 gaaggtgtca ccatgttagc caggcttgtc ttgaactcct gaccttgaga tatctgccca
1441 cctcagcctc tcaaagtgct gggattatag gcttgagcca ccacggctgg atgaatcata
1501 aattgtaaac ctgaataaaa tgctgcaacc tccaaaaaaa aaaaaaaaaa
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