LOCUS BC043406 3961 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens NudC domain containing 1, mRNA (cDNA clone MGC:50930
IMAGE:6059975), complete cds.
ACCESSION BC043406
VERSION BC043406.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3961)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3961)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP/Gazdar
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 89 Row: n Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31377641.
FEATURES Location/Qualifiers
source 1..3961
/db_xref="H-InvDB:HIT000052810"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:50930 IMAGE:6059975"
/tissue_type="Lung, large cell carcinoma"
/clone_lib="NIH_MGC_68"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3961
/gene="NUDCD1"
/gene_synonym="CML66"
/gene_synonym="FLJ14991"
/db_xref="GeneID:84955"
/db_xref="HGNC:HGNC:24306"
/db_xref="MIM:606109"
CDS 77..1828
/gene="NUDCD1"
/gene_synonym="CML66"
/gene_synonym="FLJ14991"
/codon_start=1
/product="NudC domain containing 1"
/protein_id="AAH43406.1"
/db_xref="GeneID:84955"
/db_xref="HGNC:HGNC:24306"
/db_xref="MIM:606109"
/translation="MEVAANCSLRVKRPLLDPRFEGYKLSLEPLPCYQLELDAAVAEV
KLRDDQYTLEHMHAFGMYNYLHCDSWYQDSVYYIDTLGRIMNLTVMLDTALGKPREVF
RLPTDLTACDNRLCASIHFSSSTWVTLSDGTGRLYVIGTGERGNSASEKWEIMFNEEL
GDPFIIIHSISLLNAEEHSIATLLLRIEKEELDMKGSGFYVSLEWVTISKKNQDNKKY
EIIKRDILRGKSVPHYAAIEPDGNGLMIVSYKSFTFVQAGQDLEENMDEDVSEKIKEP
LYYWQQTEDDLTVTIRLPEDSTKEDIQIQFLPDHINIVLKDHQFLEGKLYSSIDHESS
TWIIKESNSLEISLIKKNEGLTWPELVIGDKQGELIRDSAQCAAIAERLMHLTSEELN
PNPDKEKPPCNAQELEECDIFFEESSSLCRFDGNTLKTTHVVNLGSNQYLFSVIVDPK
EMPCFCLRHDVDALLWQPHSSKQDDMWEHIATFNALGYVQASKRDKKFFACAPNYSYA
ALCECLRRVFIYRQPAPMSTVLYNRKEGRQVGQVAKQQVASLETNDPILGFQATNERL
FVLTTKNLFLIKVNTEN"
BASE COUNT 1325 a 645 c 765 g 1226 t
ORIGIN
1 gtctctgtgc gaggcgtgaa gcgcggacct ttcaacaagg gctttattaa ttctcacgct
61 gcggccctgg aaagcgatgg aggtggcggc taattgctcc ctacgggtga agagacctct
121 gttggatccc cgcttcgagg gttacaagct ctctcttgag ccgctgcctt gttaccagct
181 ggagcttgac gcagctgtgg cagaggtaaa acttcgagat gatcaatata cactggaaca
241 catgcatgct tttggaatgt ataattacct gcactgtgat tcatggtatc aagacagtgt
301 ctactatatt gatacccttg gaagaattat gaatttaaca gtaatgctgg acactgcctt
361 aggaaaacca cgagaggtgt ttcgacttcc tacagatttg acagcatgtg acaaccgtct
421 ttgtgcatct atccatttct catcttctac ctgggttacc ttgtcagatg gaactggaag
481 attgtatgtc attggaacag gtgaacgtgg aaatagcgct tctgaaaaat gggagattat
541 gtttaatgaa gaacttgggg atccttttat tataattcac agtatctcac tgctaaatgc
601 tgaagaacat tctatagcta ccctacttct tcgaatagag aaagaggaat tggatatgaa
661 aggaagtggt ttctatgttt ctctggagtg ggtcactatc agtaagaaaa atcaagataa
721 taaaaaatat gaaattatta agcgtgatat tctccgtgga aagtcagtgc cacattatgc
781 tgctattgag cctgatggaa atggtctaat gattgtatcc tacaagtctt tcacatttgt
841 tcaggctggt caagatcttg aagaaaatat ggatgaagac gtatcagaga aaatcaaaga
901 acctctgtat tactggcaac agactgaaga tgatttgaca gtaaccatac ggcttccaga
961 agacagtact aaggaggaca ttcaaataca gtttttgcct gatcacatca acattgtact
1021 gaaggatcac cagtttttag aaggaaaact ctattcatct attgatcatg aaagcagtac
1081 atggataatt aaagagagta atagcttgga gatttccttg attaagaaga atgaaggact
1141 gacctggcca gagctagtaa ttggagataa acaaggggaa cttataagag attcagccca
1201 gtgtgctgca atagctgaac gtttgatgca tttgacctct gaagaactga atccaaatcc
1261 agataaagaa aaaccacctt gcaatgctca agagttagaa gaatgtgata ttttctttga
1321 agagagctcc agtttatgca gatttgatgg caatacatta aaaactactc atgtggtgaa
1381 tcttggaagc aaccagtacc ttttctctgt catagtggat cctaaagaaa tgccctgctt
1441 ctgtttgcgc catgatgttg atgccctact ctggcaacca cactccagca aacaagatga
1501 tatgtgggag cacatcgcaa ctttcaatgc tttaggctat gtccaagcat caaagagaga
1561 caaaaaattt tttgcctgtg ctccaaatta ctcgtatgca gccctttgtg agtgccttcg
1621 tcgagtattc atctatcgtc agcctgctcc catgtccact gtactttaca acagaaagga
1681 aggcaggcaa gtaggacagg ttgctaagca gcaagtagca agcctagaaa ccaatgatcc
1741 tattttagga tttcaggcaa caaatgagag attatttgtt cttactacca aaaacctctt
1801 tttaataaaa gtaaatacag agaattaatt attctaacat attggcctct ttgtactgga
1861 aaagtattca gtggtacctg gaggtctgga cagttatact gtaacctctt aagttttaat
1921 gtgctaaata tatcttgtat gattttttat tttttaataa cattggaaat atattcaaga
1981 gattatgatt ctgtaaagct gtggaatgaa gctgcagatt tagagaacat tggcttctga
2041 aaaaaaaaag agtgaagata gtactagcaa gtatacttat tttttaaaac aggctagaat
2101 ctcatgtttt atatgaaaga tgtacaattc agtgtttaaa aataaaaata tttattgtgt
2161 actctgttct ttgattagtt gctacaggct gtacctataa gatgtacagg ataatagtta
2221 aatgttgagt attgtacata tgtatttaag tggattgaat aactgagtct acatggagga
2281 ggaaatgcta gagaacagca ggtctaatat tttttaagtt tactgagaga cctttattat
2341 tattttcaaa ttaagtatag ctttatgtaa cttttagcca gttgctctgc cacagacata
2401 gacaaagaga gataagattt cacattatcc atcactgcat aacaaaccac accaaaactc
2461 agtggtttaa aacaaggact tttattattt ttcacgattc agtgagttgg ctgtctctgc
2521 tgtacagggc ctctcagcct ccagtagact agacgaatct tctttccata gtagagaaaa
2581 catcttaaga gagcaagctc caatatgcaa gagcttatcg atcctgtaca tctatcatat
2641 ttactaatgt tccattggac aaagcaaatc acatggccaa gtctagagtc agaatgaggg
2701 gactacacaa gctgacagcg gatggtatga ctcattgggg gccattgatg gaacaatctt
2761 accacacaag gacaaattat aatttatcct tgtggctctc tttatttttc taacaacttc
2821 aacaaaataa tcctgtttat atgttatagt ttcttgccac aaattttgtt ttttcaaact
2881 tacctttcca ggtttgtttt agtatgtatg tacctggaaa tttttattac tttttatacc
2941 atttcaagat atgtatctta tataaacctc aagttggatt ttatatttta ataaggaagt
3001 taagaccttc atttaagagg cagaagatta agataagaaa tataagatag aaaagctttg
3061 ttcctaacat atcttttgcc tgtctgggca agtatttgac tcaactaaat tttaatgaac
3121 gaatgaatga cagacagaga ggaggaaaaa agatgaggat tgcatacatg ttctaaaccc
3181 tttgtcagaa tgcagtttcc tagagagtat tgaggtgcta ggtagaaagt taggaaaggt
3241 cctgaggact ggtattgaca attggagtcc taatagtact ctattcgtat taggaaagag
3301 agactagata ccaaacatca cgagatcata gagatggaaa actgtatagt aaccaaaaac
3361 caaaacagtg atatttccag aactttttag tattgttgta aaacttcatg aaacaaaaga
3421 ccatttaaat agtgaattat taaaaatctt tatgatggga aagtagatct aaattttctc
3481 taaaattttc cccaaagata atatcctctt agggaacata agaaaaatgt ataataaaaa
3541 tgtggtgctt aattaaccat gactatgtat atattgccaa ttttagtaat caatattctt
3601 tgtgcatgtg atttttttgc atgattaatg ttgaattgaa agctctcagg ataattaatc
3661 ctaaatattg tcgcatgttg acctacgtta aaagatgaat aggtctagag ccgtgatttc
3721 aagctatttt cctgaaatgc ttcagggatt ccataaacat ttaaacaatg ttctaaggta
3781 catatactta gaacattgag atatatacta caagtgctaa gaatatagta ccttgtattt
3841 ttgttgattt ttatcatgtt ttaaatagga atttataaaa tatttatgat agtaataaag
3901 tagtatttta tgtgttttgc aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
3961 a
//