LOCUS BC043399 2220 bp mRNA linear HUM 18-MAR-2009 DEFINITION Homo sapiens ets variant 6, mRNA (cDNA clone MGC:50884 IMAGE:6014394), complete cds. ACCESSION BC043399 VERSION BC043399.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2220) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2220) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (09-JAN-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 89 Row: k Column: 18 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 41872473. FEATURES Location/Qualifiers source 1..2220 /db_xref="H-InvDB:HIT000052808" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:50884 IMAGE:6014394" /tissue_type="Testis, embryonal carcinoma" /clone_lib="NIH_MGC_92" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..2220 /gene="ETV6" /gene_synonym="TEL" /gene_synonym="TEL/ABL" /db_xref="GeneID:2120" /db_xref="HGNC:HGNC:3495" /db_xref="MIM:600618" CDS 275..1633 /gene="ETV6" /gene_synonym="TEL" /gene_synonym="TEL/ABL" /codon_start=1 /product="ets variant 6" /protein_id="AAH43399.1" /db_xref="GeneID:2120" /db_xref="HGNC:HGNC:3495" /db_xref="MIM:600618" /translation="MSETPAQCSIKQERISYTPPESPVPSYASSTPLHVPVPRALRME EDSIRLPAHLRLQPIYWSRDDVAQWLKWAENEFSLRPIDSNTFEMNGKALLLLTKEDF RYRSPHSGDVLYELLQHILKQRKPRILFSPFFHPGNSIHTQPEVILHQNHEEDNCVQR TPRPSVDNVHHNPPTIELLHRSRSPITTNHRPSPDPEQRPLRSPLDNMIRRLSPAERA QGPRPHQENNHQESYPLSVSPMENNHCPASSESHPKPSSPRQESTRVIQLMPSPIMHP LILNPRHSVDFKQSRLSEDGLHREGKPINLSHREDLAYMNHIMVSVSPPEEHAMPIGR IADCRLLWDYVYQLLSDSRYENFIRWEDKESKIFRIVDPNGLARLWGNHKNRTNMTYE KMSRALRHYYKLNIIRKEPGQRLLFRFMKTPDEIMSGRTDRLEHLESQELDEQIYQED EC" BASE COUNT 555 a 651 c 546 g 468 t ORIGIN 1 gcgtcccggg tccccgcgcc gcgccgcgac ctgcagaccc cgccgccgcg ctcgggcccg 61 tctcccacgc ccccgccgcc ccgcgcgccc aactccgccg gccgccccgc cccgccccgc 121 gcgctccaga cccccggggc ggctgccggg agagatgctg gaagaaactt cttaaatgac 181 cgcgtctggc tggccgtgga gcctttctgg gttggggaga ggaaaggaaa gtggaaaaaa 241 cctgagaact tcctgatctc tctcgctgtg agacatgtct gagactcctg ctcagtgtag 301 cattaagcag gaacgaattt catatacacc tccagagagc ccagtgccga gttacgcttc 361 ctcgacgcca cttcatgttc cagtgcctcg agcgctcagg atggaggaag actcgatccg 421 cctgcctgcg cacctgcgct tgcagccaat ttactggagc agggatgacg tagcccagtg 481 gctcaagtgg gctgaaaatg agttttcttt aaggccaatt gacagcaaca cgtttgaaat 541 gaatggcaaa gctctcctgc tgctgaccaa agaggacttt cgctatcgat ctcctcattc 601 aggtgatgtg ctctatgaac tccttcagca tattctgaag cagaggaaac ctcggattct 661 tttttcacca ttcttccacc ctggaaactc tatacacaca cagccggagg tcatactgca 721 tcagaaccat gaagaagata actgtgtcca gaggaccccc aggccatccg tggataatgt 781 gcaccataac cctcccacca ttgaactgtt gcaccgctcc aggtcaccta tcacgacaaa 841 tcaccggcct tctcctgacc ccgagcagcg gcccctccgg tcccccctgg acaacatgat 901 ccgccgcctc tccccggctg agagagctca gggacccagg ccgcaccagg agaacaacca 961 ccaggagtcc taccctctgt cagtgtctcc catggagaat aatcactgcc cagcgtcctc 1021 cgagtcccac ccgaagccat ccagcccccg gcaggagagc acacgcgtga tccagctgat 1081 gcccagcccc atcatgcacc ctctgatcct gaacccccgg cactccgtgg atttcaaaca 1141 gtccaggctc tccgaggacg ggctgcatag ggaagggaag cccatcaacc tctctcatcg 1201 ggaagacctg gcttacatga accacatcat ggtctctgtc tccccgcctg aagagcacgc 1261 catgcccatt gggagaatag cagactgtag actgctttgg gattacgtct atcagttgct 1321 ttctgacagc cggtacgaaa acttcatccg atgggaggac aaagaatcca aaatattccg 1381 gatagtggat cccaacggac tggctcgact gtggggaaac cataagaaca gaacaaacat 1441 gacctatgag aaaatgtcca gagccctgcg ccactactac aaactaaaca ttatcaggaa 1501 ggagccagga caaaggcttt tgttcaggtt tatgaaaacc ccagatgaaa tcatgagtgg 1561 ccgaacagac cgtctggagc acctagagtc ccaggagctg gatgaacaaa tataccaaga 1621 agatgaatgc tgaaggaacc aacagtccac ctcagcgggc cagcagccca gggaacccct 1681 gcccaccagg attgctggaa gtgtgacgga gcaggcgggc tgaggagagt ggaaaaggaa 1741 gcgacccaga aatggcaggg acacttctct tgcagaccaa gagggaccct ggagcacctt 1801 agacaaacta cccagcacag gcggggctgg aattctggcg gagggcacga gcctgggact 1861 ccatgtcacg tttccttctg atttggaatc tctccatctg taattcctca ccctcaccct 1921 tccaccgttg ttagtatcat ggtgtttttg tttttgtttt tgttttaaga acctgcagtt 1981 tgactcttca tcgttcatct aggggaagac atctgatgtt gttttcctat ggaaatatat 2041 atctattata tatatatttt ttgcaaatct cacaaagtgc ggcaagccca gctggtcagg 2101 aaagagaata cttgcagagg ggttcaggtt cctctttttc ctgccacgtg gatcaggtct 2161 gttcctgtta ctgttgggtc ttggctgaaa aaaaaaatgc ttttaaaaaa aaaaaaaaaa //