LOCUS BC043258 3960 bp mRNA linear HUM 15-AUG-2006
DEFINITION Homo sapiens F-box protein 11, mRNA (cDNA clone IMAGE:5296581),
partial cds.
ACCESSION BC043258
VERSION BC043258.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3960)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3960)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 76 Row: l Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 30089921.
FEATURES Location/Qualifiers
source 1..3960
/db_xref="H-InvDB:HIT000097578"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5296581"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene <1..3960
/gene="FBXO11"
/gene_synonym="FBX11"
/gene_synonym="FLJ12673"
/gene_synonym="MGC44383"
/gene_synonym="PRMT9"
/gene_synonym="UG063H01"
/gene_synonym="VIT1"
/db_xref="GeneID:80204"
/db_xref="HGNC:HGNC:13590"
/db_xref="MIM:607871"
CDS <1..2748
/gene="FBXO11"
/gene_synonym="FBX11"
/gene_synonym="FLJ12673"
/gene_synonym="MGC44383"
/gene_synonym="PRMT9"
/gene_synonym="UG063H01"
/gene_synonym="VIT1"
/codon_start=1
/product="FBXO11 protein"
/protein_id="AAH43258.2"
/db_xref="GeneID:80204"
/db_xref="HGNC:HGNC:13590"
/db_xref="MIM:607871"
/translation="SGSRPRPVQQQQQQPPQQPPPQPPQQQPPQQQPPPPPQQQQQQQ
PPPPPPPPPPLPQERNNVGERDDDVPADMVAEESGPGAQNSPYQLRRKTLLPKRTACP
TKNSMEGASTSTTENFGHRAKRARVSGKSQDLSAAPAEQYLQEKLPDEVVLKIFSYLL
EQDLCRAACVCKRFSELANDPILWKRLYMEVFEYTRPMMHPEPGKFYQINPEEYEHPN
PWKESFQQLYKGAHVKPGFAEHFYSNPARYKGRENMLYYDTIEDALGGVQEAHFDGLI
FVHSGIYTDEWIYIESPITMIGAAPGKVADKVIIENTRDSTFVFMEGSEDAYVGYMTI
RFNPDDKSAQHHNAHHCLEITVNCSPIIDHCIIRSTCTVGSAVCVSGQGACPTIKHCN
ISDCENVGLYITDHAQGIYEDNEISNNALAGIWVKNHGNPIIRRNHIHHGRDVGVFTF
DHGMGYFESCNIHRNRIAGFEVKAYANPTVVRCEIHHGQTGGIYVHEKGRGQFIENKI
YANNFAGVWITSNSDPTIRGNSIFNGNQGGVYIFGDGRGLIEGNDIYGNALAGIQIRT
NSCPIVRHNKIHDGQHGGIYVHEKGQGVIEENEVYSNTLAGVWVTTGSTPVLRRNRIH
SGKQVGVYFYDNGHGVLEDNDIYNHMYSGVQIRTGSNPKIRRNKIWGGQNGGILVYNS
GLGCIEDNEIFDNAMAGVWIKTDSNPTLRRNKIHDGRDGGICIFNGGRGLLEENDIFR
NAQAGVLISTNSHPILRKNRIFDGFAAGIEITNHATATLEGNQIFNNRFGGLFLASGV
NVTMKDNKIMNNQDAIEKAVSRGQCLYKISSYTSYPMHDFYRCHTCNTTDRNAICVNC
IKKCHQGHDVEFIRHDRFFCDCGAGTLSNPCTLASEPTHDTDTLYDSAPPIESNTLQH
N"
BASE COUNT 1312 a 712 c 833 g 1103 t
ORIGIN
1 agcgggtcgc ggccgcgccc ggtgcagcaa cagcagcagc agcccccgca gcagccgccg
61 ccgcagccgc cccagcagca gccgccccag cagcagcctc cgccgccgcc gcagcagcag
121 cagcagcagc agcctccgcc gccgccaccg ccgcctccgc cgctgcctca ggagcggaac
181 aacgtcggcg agcgggatga tgatgtgcct gcagatatgg ttgcagaaga atcaggtcct
241 ggtgcacaaa atagtccata ccaacttcgt agaaaaactc ttttgccgaa aagaacagcg
301 tgtcccacaa agaacagtat ggagggcgcc tcaacttcaa ctacagaaaa ctttggtcat
361 cgtgcaaaac gtgcaagagt gtctggaaaa tcacaagatc tatcagcagc acctgctgaa
421 cagtatcttc aggagaaact gccagatgaa gtggttctaa aaatcttctc ttacttgctg
481 gaacaggatc tttgtagagc agcttgtgta tgtaaacgct tcagtgaact tgctaatgat
541 ccaattttgt ggaaacgatt atatatggaa gtatttgaat atactcgccc tatgatgcat
601 cctgaacctg gaaaattcta ccagattaat ccagaagagt atgaacatcc aaatccctgg
661 aaagagagtt tccagcagtt gtataaaggt gcacatgtaa agccaggatt tgctgaacat
721 ttctacagta accctgcaag atataaagga agagaaaata tgttgtatta tgatactatt
781 gaagatgccc ttggtggggt acaagaggct cattttgatg gacttatctt tgttcattct
841 ggaatatata ctgatgaatg gatatatatt gaatctccaa tcaccatgat tggtgcagca
901 cctgggaaag tggcagacaa agttataatt gaaaacacta gagattcaac cttcgttttt
961 atggaaggct ctgaagatgc ttatgttgga tatatgacaa taaggtttaa ccctgatgac
1021 aaatctgcac aacaccacaa tgcacaccac tgcttagaga ttacagtaaa ttgtagccct
1081 attattgatc actgtatcat ccgaagtaca tgtacagttg gttctgcagt atgtgttagt
1141 ggtcaaggag catgtcccac catcaagcac tgtaacatca gtgactgtga aaatgttgga
1201 ctatatataa cagatcatgc acagggaata tatgaggata atgaaatttc caataatgcg
1261 ttagctggga tttgggttaa aaatcatgga aacccaatta ttagacggaa tcatattcat
1321 catggacgtg atgttggtgt gttcacattt gatcatggca tgggttactt tgaaagttgc
1381 aatatacaca gaaataggat agcaggcttt gaagtaaaag cctatgctaa ccctacagtg
1441 gttcgatgtg aaattcacca tgggcagact ggaggaatat atgtccatga aaaaggaaga
1501 ggacaattca tagagaataa aatctatgca aacaactttg caggtgtatg gattacctca
1561 aatagtgacc caacaataag gggaaattct atatttaatg gaaatcaagg aggagtttac
1621 atctttggtg atggacgagg ccttattgaa ggaaatgaca tttatggcaa tgcattagca
1681 ggaattcaaa ttaggacaaa cagttgtcca attgttcggc ataacaaaat tcatgatggc
1741 cagcatggtg ggatttatgt gcatgaaaag ggacaaggag taatagaaga gaatgaagtt
1801 tatagtaaca ctctagctgg agtctgggtg acaactggca gcactccagt actgagaaga
1861 aaccggatac acagtggcaa gcaggttggt gtttattttt atgacaatgg acatggagtg
1921 ctagaagaca atgatatcta taatcatatg tattcagggg ttcagataag gactggaagc
1981 aaccccaaaa ttagacgcaa caaaatctgg ggaggacaga atggtggaat tctagtttat
2041 aattctggtc taggctgtat agaagacaat gaaatatttg acaatgcaat ggctggagtc
2101 tggattaaga cagatagtaa tcctacacta agaagaaata aaatccatga tggaagagat
2161 ggtggcatct gtatatttaa tgggggtcga ggtctccttg aagaaaatga tattttcagg
2221 aatgctcaag caggtgttct catcagcact aatagtcatc caatcttaag gaaaaacaga
2281 atatttgatg gatttgccgc aggtattgaa attacaaatc acgcaactgc aacactagaa
2341 ggcaatcaga tttttaacaa ccggtttgga ggcttatttt tagcatctgg tgttaatgtg
2401 acaatgaaag ataacaaaat aatgaacaat caagatgcca tagaaaaggc tgttagtaga
2461 ggccaatgtt tatataaaat atcaagttat accagctatc ccatgcatga tttctacaga
2521 tgtcatactt gtaacaccac agatcgaaat gccatatgtg tgaactgcat taagaagtgc
2581 catcagggac atgatgtaga gtttattaga catgataggt ttttctgtga ctgtggtgct
2641 ggaacactgt ctaatccttg tacattagct agtgagccta cacatgatac agatacacta
2701 tatgactctg ctccacctat agaatctaat acattgcagc acaactgaat tccttcccta
2761 aagaaaaagt cctgccattg taacatcata acttaaaaca cttttttgga agaagattta
2821 aaatatttgc ccatgctaca ggaagagact gtattaaaaa tggatacaca aggtcagttg
2881 acactatgaa gctcaagcta ccaaaaagaa agtggcaata tattgactca ggatctcaaa
2941 gctgggtgtt ttagcattac tgtgtaaaga cttgaaggga cagaagtgaa gaaaataagc
3001 tgcaattttg tacagatacc aacttctgaa aagctggtgt ttttacaact agcattgaat
3061 gcagtccaat ttgcagtagt aatcttcaat agacaagcag ctttgttgct gcctttatgg
3121 acatgggtac caattgcttt tgtaatatgg taaaaatgtg agctagcact tctgcgttcc
3181 ttttgatttt tttttttaac atgtattcag attgagaaat atgattttaa tgctttaatc
3241 tcatgtagtt tgtttttaat ttcaagcaaa atcttactgt acttgaatgt gccctgtttt
3301 gttagcacac ctagacttgc tgtaactgta ctcatgtccc agtatgtacg ttctttctat
3361 gaaagagaaa acactaatct taaattatat ccagcaatgt ttctggtatc ctttaagaaa
3421 agttaagact attatttcct tcccttccct gtgcagcatt caaaatcacc cctagaaaaa
3481 gtgagtgttt taatgagact tcctaggaag ggatgcactg taaaacaaaa gtattcttgt
3541 aactcagttt tgtgaaaggt aaaaaactac tatgttttaa gtacacttta gaaagtctct
3601 tcaaaacaaa cagtcctgta tttgaactct gttcatagtt tttttttgaa cagtttagac
3661 aaaactgctg gaaattaaac caatttcctg cattaagctg agacaagtat atatacagcc
3721 ctatacagtt tcatagcttt tcctccccca tttatgtgta ttggtgacag tgggtataaa
3781 acagcctgaa agtgtatgca tgtaccataa catctagact taatatattg tggagtattc
3841 aataaccatt atgtagaagg tagataagaa ttaaaagggt ttaatttcct agaaagaaaa
3901 tggaaaaatg gtcattttta aaaaataaag tttattagat catgaaaaaa aaaaaaaaaa
//