LOCUS BC043256 2195 bp mRNA linear HTC 13-SEP-2006
DEFINITION Homo sapiens chromosome 10 open reading frame 78, mRNA (cDNA clone
IMAGE:5296504), with apparent retained intron.
ACCESSION BC043256
VERSION BC043256.2
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2195)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2195)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC043256.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 76 Row: l Column: 7
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..2195
/db_xref="H-InvDB:HIT000052788"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5296504"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
BASE COUNT 670 a 411 c 464 g 650 t
ORIGIN
1 ggagggaggt accctgctga ggggaagggg ggatccctga cacctgggct tccccgggag
61 tcggctgtgg agtcgagttg agctcccttt ccgggtctgg ggaactcaac ctcaccttat
121 gcctggggtc tccggggaac tagtgggctt tctgcaacgg ggggaaggag gggacgactc
181 ccgcccctag tttacccctc aaaagttaat gcctttgtcg gaggaagcaa tttcagtcca
241 ctctcctttt cagtccctgt tggccgctta aactaaaagg ctacagacgg gcttaaatgc
301 gtctccgctg tgtttcttat gcctcgggcc ggcagggtaa cgggttctag tcacagcttg
361 tagagttcag gatgggtgac attcaggtcc tattgttttt gagtcaaggt ttcggctata
421 gcttcttgaa ttatgaagct gtcataataa agaattcctg attatctaaa gctgttattc
481 ttccctactt ccaaggcaga atttgaatat attttggtgg atgaaacgaa aacaaggaga
541 gtcttgtgac tatgagatac tagctggttg atgtatcatg aaaaacttag tggtccctat
601 gtgggaaggt aaatggaaaa ctgcaaaaag agcaagaatg aattacaaag tgaaattaga
661 agaaatatct ggcttacttg tggatgcttt gtacaccaat acaatatatt atttgataaa
721 agtcgactat agagaggtgt ggttaattcg attattttat aatttttctt ttttagagaa
781 aaaccaagat ttcactttca agatggaaag tccgtcagac tcagctgtgg ttttacctag
841 cactcctcag gcctctgcga atccatcatc tccctataca aatagttccc gaaaacaacc
901 tatgagtgca acacttagag aaagattaag gaaaacaaga ttttcattta attcctctta
961 caatgtggtg aaacgtctta aagtagagag tgaagaaaat gatcagacct tttcagagaa
1021 accagcatct tccacagagg aaaactgttt ggaatttcaa gaaagtttta aacatataga
1081 cagtgaattt gaagaaaata caaatttgaa aaatactttg aagaatctca atgtctgtga
1141 atctcagtca cttgattctg gatcatgcag tgctctccaa aatgagtttg tgagtgagaa
1201 gcttcctaaa caaagattaa acgctgaaaa agccaaattg gtgaagcagg ttcaggagaa
1261 agaagacctt cttcggaggc taaaactagt caaaatgtat agatcaaaga atgatctgtc
1321 tcagttacag ttgttaataa agaagtggag aagctgtagc cagctcttgc tttatgagtt
1381 gcagtcagct gtgtctgaag agaacaagaa actaagcctt actcaattga tagaccacta
1441 tgggttagat gataaattac tacactataa cagaagtgaa gaagaattta tagatgttta
1501 attcctgatt tttgctccag aatatctttg agaatgacaa cttaattaaa agatacttag
1561 gcactttttt tttttttttg agactgagtt tcgctcttgt catcctggct ggagtgtgat
1621 ggtgcgatct tgactcactg caacctctgc ctctcgggtt ccagcaattc tcctgcctca
1681 gcctcccgag tagctgagat tacaggcgcc cgccaccatg cccggctaat ttttgcattt
1741 ttagtagaga ctgggtttca ccacgttggc caggctggtc tcgaactcct gacctcaggt
1801 gatccaccgc ctaggcctcc caaaaccatt agggctcaga ggaaggtatc ccaatgaata
1861 tcaattaagg gcactttaat atataaatta taaactaagt tctaaaagga aaattagtat
1921 tttggataga tttgtcaaaa cgacatttaa gtcatgttta aaaagtcatt tgggcagttc
1981 tggaaactag ttttaataca tttgtttttt atgacaaaaa gttttatttt aaatgttaaa
2041 aattgtccaa tctggtgaat gtctaaccct aaagtttaaa aatttctgcc tcctaagttt
2101 atgtaccttg tttccatcca tttaccacat atttccatct gatagtctag caggtaatta
2161 aacttatatg tccaaaacca aaaaaaaaaa aaaaa
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