LOCUS BC043206 3115 bp mRNA linear HUM 28-JUL-2005
DEFINITION Homo sapiens junctophilin 2, mRNA (cDNA clone IMAGE:5295024),
partial cds.
ACCESSION BC043206
VERSION BC043206.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3115)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3115)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC043206.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 76 Row: g Column: 24.
FEATURES Location/Qualifiers
source 1..3115
/db_xref="H-InvDB:HIT000097533"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5295024"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene <1..3115
/gene="JPH2"
/gene_synonym="FLJ40969"
/gene_synonym="JP-2"
/gene_synonym="JP2"
/db_xref="GeneID:57158"
/db_xref="MIM:605267"
CDS <1..1254
/gene="JPH2"
/gene_synonym="FLJ40969"
/gene_synonym="JP-2"
/gene_synonym="JP2"
/codon_start=1
/product="JPH2 protein"
/protein_id="AAH43206.2"
/db_xref="GeneID:57158"
/db_xref="MIM:605267"
/translation="EADIDATTTETYMGEWKNDKRSGFGVSERSSGLRYEGEWLDNLR
HGYGCTTLPDGHREEGKYRHNVLVKDTKRRMLQLKSNKVRQKVEHSVEGAQRAAAIAR
QKAEIAASRTSHAKAKAEAAEQAALAANQESNIARTLARELAPDFYQPGPEYQKRRLL
QEILENSESLLEPPDRGAGAAGLPQPPRESPQLHERETPRPEGGSPSPAGTPPQPKRP
RPGVSKDGLLSPGAWNGEPSGEGSRSVTPSEGAGRRSPARPATERMAIEALQAPPAPS
REPEVALYQGYHSYAVRTTPPEPPPFEDQPEPEVSGSESAPSSPATAPLQAPTLRGPE
PARETPAKLEPKPIIPKAEPRAKARKTEARGLTKAGAKKKARKEAALAAEAEVEVEEV
PNTILICMVILLNIGLAILFVHLLT"
BASE COUNT 609 a 954 c 959 g 593 t
ORIGIN
1 gaggccgata tcgacgccac caccaccgag acctacatgg gcgagtggaa gaacgacaaa
61 cgctcgggct tcggcgtgag cgaacgctcc agtggcctcc gctacgaggg cgagtggctg
121 gacaacctgc gccacggcta tggctgcacc acgctgcccg acggccaccg cgaggagggc
181 aagtaccgcc acaacgtgct ggtcaaggac accaagcgcc gcatgctgca gctcaagagc
241 aacaaggtcc gccagaaagt ggagcacagt gtggagggtg cccagcgcgc cgctgctatc
301 gcgcgccaga aggccgagat tgccgcctcc aggacaagcc acgccaaggc caaagctgag
361 gcagcggaac aggccgccct ggctgccaac caggagtcca acattgctcg cactttggcc
421 agggagctgg ctccggactt ctaccagcca ggtccggaat atcagaagcg ccggctgctg
481 caggagatcc tggagaactc ggagagcctg ctggagcccc ccgaccgggg cgccggcgca
541 gcgggcctcc cacagccgcc ccgcgagagc ccgcagctgc acgagcgtga gacccctcgg
601 cccgagggtg gctccccgtc accggccggg acgcccccgc agcccaagcg gcccaggccc
661 ggggtgtcca aggacggcct gctgagccca ggcgcctgga acggcgagcc cagcggtgag
721 ggcagccggt cagtcactcc gtccgagggc gcgggccgcc gcagccccgc gcgtccagcc
781 accgagcgca tggccatcga ggctctgcag gcaccgcctg cgccgtcgcg ggagccggag
841 gtggcgcttt accagggcta ccacagctat gctgtgcgca ccacgccgcc cgagccccca
901 ccctttgagg accagcccga gcccgaggtc tccgggtccg agtccgcgcc ctcgtccccg
961 gccaccgccc cgctgcaggc ccccacgctc cgaggccccg agcctgcacg cgagaccccc
1021 gccaagctgg agcccaagcc catcatcccc aaagccgagc ccagggccaa ggcccgcaag
1081 actgaggctc gagggctgac caaggcgggg gccaagaaga aggcgcggaa ggaggccgca
1141 ctggcggcag aggcggaggt ggaggtggaa gaggtcccca acaccatcct catctgcatg
1201 gtgatcctgc tgaacatcgg cctggccatc ctctttgttc acctcctgac ctgaccgtcg
1261 cttaccagag ccagaagttc ctgctgagga catgaggacc cgtctttttg cagtgccagg
1321 cagggtggcc aaagaggact ggactctgga cctggagccc cgtggtccag ttcacattca
1381 ccccacaaga gtttcaggag gcctcccacg gtgcctgtgc tgggtggcgg tggtggtgcc
1441 aagaggaatg gaatgtcctg ggctccttca ggagctctct acccaggggc aaggagagcc
1501 cagagagaag cgccctggtc tcttgagctt cctgatctgc tcctgtcccc cgctctcctc
1561 cactcccttg cctttcccta ggttgtcccc tccctgggct tttgtgtgtt ttgggagatg
1621 tcacctaacc aggacattga tattcaatcc catccccctt cctcccaccc tgccccactt
1681 tgatttaatc ctttggctgt gggctgaggc ctcccaggga agctgggtgg ggtgggtgtt
1741 gagaccccct cagaccagca cagagacctg tccttgtgca gtctgcaccc tgcactccct
1801 cccttgcctg tagatgttct ggatgacagt agaggaaatg gacaaggtca gtttgaatat
1861 cccagaacac agtgctctgt ctcctcccac cagtccagtt agcttccctt ctggaccaat
1921 agacgagggg agaccccatg gatcctctgg ctgggaagcc actgaccagg tggccagggg
1981 gcagggtggg aagaggggtt aaggtgcagt gatgatggcc tgttttggag tgtgtctgag
2041 actgggattg catttggggt ttcccgtgtg cttgggatgc tagagggtca cctgcaggag
2101 gcctggggcc ggcgagaaat ctcctgtgat gccctgtgaa atggcttgtc tcctccccca
2161 tcagggccca ccgaaagctc aggggagcac agaagcccat ggaagcccag ggagatgtcc
2221 ctggggcaga cactaaggca ggtgttgaag acaagctgct tgtcaagaag catttcccgg
2281 caagagaggg gcaagtctgg ggctccaact gggtacagcc tgggtgcagt tataagcccc
2341 tttggcttac ttggtagaag atggctactt ggatgtacct cacttaaaga tgttttgtac
2401 cacactaggt ctctgggccc ttgtgcttcc tgtgggtggg gtgagggcca aaggctatgg
2461 tttcctgcct ccaggagaat ggagagaaag ggcttccagg cccctccaag cctggggaag
2521 gacgtggcat ccaagctgag ccagagggaa ctgctgctgt cctcccttca tttctgtgga
2581 ccttggaggc tttggctttg tggcagggcc tccccaggca gctctgggac ctaggagttt
2641 gcttctgata gggtcagctt tcccatttcc cttcaatgct tgggaacctt ctcccttagc
2701 ttcacacttg ccgtttcaag ccctgctggg accttgtggc ttggctggaa tccaggactg
2761 tattttcatg gagaagaacc tgcagattct tccatcctca gctggccatg gcccacagct
2821 ctgcatctgc atctgagctt ctcaagactc ctggagcatg aggggaatgg ggcggggcca
2881 ctgctctgtg ctgacgggct ccgtctcgga gattcttgtc ctgttttttt tctgttgttt
2941 tttttggctg gtgctgggga caagcctgtg cctgccaaag ctcccaggcc aagtttgggg
3001 gctggtgttt ggggttgggt ttggggttca ggatgctgca gtctgtgcaa taataaaccc
3061 gcatctgctc acggaaaaaa aaaaaaaaaa aaaaaaaaca aaaaaaaaaa aaaaa
//