LOCUS BC043175 4126 bp mRNA linear HUM 11-AUG-2006 DEFINITION Homo sapiens cyclin J, mRNA (cDNA clone MGC:44167 IMAGE:5287365), complete cds. ACCESSION BC043175 VERSION BC043175.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 4126) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 4126) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (09-JAN-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 76 Row: c Column: 12 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 40254888. FEATURES Location/Qualifiers source 1..4126 /db_xref="H-InvDB:HIT000052782" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:44167 IMAGE:5287365" /tissue_type="Brain, hypothalamus" /clone_lib="NIH_MGC_96" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..4126 /gene="CCNJ" /gene_synonym="bA690P14.1" /db_xref="GeneID:54619" /db_xref="HGNC:HGNC:23434" CDS 370..1488 /gene="CCNJ" /gene_synonym="bA690P14.1" /codon_start=1 /product="cyclin J" /protein_id="AAH43175.1" /db_xref="GeneID:54619" /db_xref="HGNC:HGNC:23434" /translation="MELEGQWWRGQLAADIHQALRYKELKLPSYKGQSPQLSLRRYFA DLIAIVSNRFTLCPSARHLAVYLLDLFMDRYDISIQQLHLVALSCLLLASKFEEKEDS VPKLEQLNSLGCMTNMNLVLTKQNLLHMELLLLETFQWNLCLPTAAHFIEYYLSEAVH ETDLHDGWPMICLEKTKLYMAKYADYFLEVSLQVAAACVASSRIILRLSPTWPTRLHR LTAYSWDFLVQCIERLLIAHDNDVKEANKQRGQAGPQSAQLSVFQTASQPSRPVHFQQ PQYLHQTHQTSLQYRHPTSEQPSCQQIVSTTHTSSYTLQTCPAGFQTSVQGLGHMQTG VGMSLAIPVEVKPCLSVSYNRSYQINEHYPCITPCFER" BASE COUNT 1198 a 805 c 906 g 1217 t ORIGIN 1 agcgggcggt atgctgaccg tacccaggcg ggagccgccg cgccgccgcc tggcgctgca 61 cctgggcccg gcccggccgc caattggacg gctcggggcg accccgctgt atcgcgagac 121 gagattggca gcggcggggc ctcaagtgcc cccgcgctgg ctttgtatgc ggagccgcct 181 gccggtcctt taacaatggg cggcgcgagc gtccaggcgc tgggctctag ctgaggccgg 241 cgcttagcgg cccactgtcc gcagcatgag cggggccggc gtccgccgca cgacggcggg 301 gctggggctg tgagggccgc ggttccggac tcgagttgcc gcgtcgggct gggcgcgccg 361 ccgggtccca tggagctgga ggggcagtgg tggcgaggac agctggccgc cgatattcac 421 caagcgcttc gctacaagga gctgaagttg ccctcctata aaggccagtc ccctcagtta 481 agtctcagac ggtattttgc tgacttgatt gccattgtga gcaatcgctt cacactctgc 541 ccttctgccc gccatcttgc tgtctattta ctggacctgt ttatggaccg ctatgacatc 601 tctatccagc agctgcattt agttgcgctt tcctgcctgc ttctagcaag taaatttgaa 661 gaaaaagaag acagtgtgcc taagctggag cagctcaaca gcctgggttg tatgactaat 721 atgaatctag tattaacaaa acaaaatttg ctacatatgg aactattatt attagaaacc 781 tttcagtgga acctctgcct tccaacagcc gcccatttca ttgagtatta tctctctgaa 841 gcagtacacg aaacagatct tcatgacggc tggccaatga tttgcttgga aaagactaaa 901 ctctacatgg ccaaatatgc agattacttc ctggaagtat ctttgcaagt agctgctgca 961 tgtgtggctt cttcgaggat tatacttcgt ctttctccaa cgtggcctac aagactacat 1021 cgtcttactg cctactcttg ggatttctta gtgcagtgta ttgaacgact gttgatcgct 1081 catgataatg atgtgaaaga agcaaacaaa cagagagggc aagcaggacc tcagtcagcg 1141 caactaagtg tattccagac agcctcccag ccatcacggc cagttcactt tcagcaacct 1201 cagtatctcc atcagacaca tcagacctca ctgcagtatc gccatcctac gtcagaacaa 1261 ccaagctgtc agcagattgt atcgaccaca cacacctcat cttacacact acagacatgt 1321 cctgctggct tccaaactag tgttcagggc cttgggcaca tgcagactgg tgttgggatg 1381 tcactggcaa taccagtaga agttaagccc tgtctgagtg tttcttacaa ccggagttat 1441 cagataaatg aacattaccc ttgtattact ccatgttttg aaaggtgatt atttgtgaag 1501 ctgataacca acccagactg ctttgtgaca tgaagctatg ggtaagcgtt ttgtaaactt 1561 ctgttcaaaa ggaaagggat ctaaatgaca tcagaactct tcaggtacca gcaccaggaa 1621 gactgaatat cctttttaat gcaccatgaa tcctgggaga ctaagcaaat taacagtatg 1681 tcaaattctg ttacaacaaa tccctgtatg acaaaaatgt tcaagtcctg gctgatggtc 1741 caaatatttc aaaaatattc agtacaacag aaaatttgga cagacttcaa tttgccattt 1801 tgagatttga cctgtggtag catctgggcc taatgttggc ttctaagtca aagactaaat 1861 gtttatctca tctatggact tgccaaacag tcttttatga aggaaagtta cagtattaat 1921 ttttgaaaag gtttttttta ttctgcaatt ttttattttt gttctacaca tgaatttttg 1981 actaagttta aactcatgaa ttgttatgct ataccaatct gcagtaaaaa aaattttttt 2041 agatgattct atataacttc gtctcacaaa tagtgtaggt atctgggttt atatactaaa 2101 attaagggtg gagaagatct tattttttaa atcatggtca taatttttct ttttttccct 2161 aagtgatcaa catcaaattt ttagaattaa aatacattta actcagggaa tttgtactac 2221 ttggaaacac ttaactgtaa tgcaacatgc cttgggaatg ttatagtgtg aactaccttt 2281 ataacatagg ttaaaatacg cttgctaggg tgtgttttca aatgagaaca taatatagct 2341 cagaatgaag tggtagttcc tgtgattcat aatacatatg taggttttgc atatctcagt 2401 gcaatccatg atttatactc agaatcgaca ttcttaaaaa gttatttcaa gggatggcat 2461 aactgtaaga ggtcagtgct agaataaagt cctgtaggtt tattttggaa gggactgtgg 2521 ccagggtagt tctcaggttg tgctagagca gcactttgtt atgtggaaga caggtttttt 2581 aagcaacctt tgaatccagc tctagtcagt ctaagcaggc aaaggtaact gatgactaaa 2641 tttcagtagc tactttcatt ggattgaccc tacaactgcc ctgggacatt tcactgtacc 2701 agtattaact gcaaacagca ataattgtca ttacagcaag ggcagtttgg gggtaaagca 2761 ttttggagga ataaccttaa aaagttaaaa agtcattgta ataactgata aactgtatac 2821 attgtgctcc tttctgtggg agaagaaaga tttggtggag ggaagctttc tggtttaaaa 2881 attagtaagg tgtgtctttt tgtttttttt aagatagcac ttgaatagaa gggaaaactg 2941 catggcagat acgtgactgc cacaatatgc atcgaagaca aacttactat aaagatgttg 3001 tgggtatgca gcaggagtct cagtaatcaa gccaatggcc tttgtcagga agggaagggg 3061 ctcaacacag tgatggactg atccagatgg ctcccgggga tgaatgtggg tgggtagctt 3121 ctgtcagtat caatgcttag agaaatatcc tttccttaaa aagaaaataa cttttatatt 3181 tagagtacat agggcatgat gtggatttat tagtctggta gataaaatga aaaaccactc 3241 aggtaagaac actcactcat ggcagttttt aagcatgaaa attgttttct gaaagtatca 3301 tcacttttcc tttttaaaga aggctgctaa ttggattttg gtagttctta cctcaagaaa 3361 acttgaatta tttgggggaa agtaggctca aaagagaata tatctttcac attcacattc 3421 agaacccagc aacctggagt ccaattttca gtattttaac tacctcaata atgctatgaa 3481 tgtaagatat tgggatagag atcccaactt gaaacaacag ccagtgcctg tggtaactta 3541 atgtcttgtc aaatactttt attgattggt ttatatgcca ttcttgttat agaagaatat 3601 gcattttaaa aaagcttatt aataacactt tcccaattta tattttaaaa agctaaagaa 3661 cactggatta ataatctttt gggagggtag aataaaataa ttgattacta ttgctgcata 3721 cccggggtgg gatggggtgg ttggagaacc agaactattt ttaaaacatt aggtttcaat 3781 ataaatacaa ctcacaactg ctagctttgg ggggtggggg aacattgtgt gggttttgtt 3841 ttgtttaatt tattgattag tctttaaagt aggctttttt tttttttttg agaatactgg 3901 accatcatta aatgtgtact gtgaagagat taatatgtat gaagggcttt accaaagtcc 3961 actaaataaa cactactcaa gtacagactg caaaccaaaa tgtatctgtg ttacgacatt 4021 aattgcaaat agcaagtatg gtgctaaagt ctacaccaat ggaattagat gagtgctatg 4081 cacttaattt taaaataaaa ctagttttca gcaaaaaaaa aaaaaa //