LOCUS BC043156 2360 bp mRNA linear HUM 30-JUL-2005
DEFINITION Homo sapiens phosphofructokinase, platelet, mRNA (cDNA clone
IMAGE:5286102), complete cds.
ACCESSION BC043156
VERSION BC043156.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2360)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2360)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 76 Row: a Column: 4
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..2360
/db_xref="H-InvDB:HIT000097487"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5286102"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2360
/gene="PFKP"
/gene_synonym="PFK-C"
/gene_synonym="PFKF"
/db_xref="GeneID:5214"
/db_xref="MIM:171840"
CDS 1519..2127
/gene="PFKP"
/gene_synonym="PFK-C"
/gene_synonym="PFKF"
/codon_start=1
/product="PFKP protein"
/protein_id="AAH43156.1"
/db_xref="GeneID:5214"
/db_xref="MIM:171840"
/translation="MGGYCGYLANMGGLAAGADAAYIFEEPFDIRDLQSNVGHLTEKM
KTTIQRGLVLRNESCSENYTTDFIYQLYSEEGKGVFDCRKNVLGHMQQGGAPSPFDRN
FGTKISARAMEWITAKLKEARGRGKKFTTDDSICVLGISKRNVIFQPVAELKKQTDFE
HRIPKEQWWLKLRPLMKILAKYKASYDVSDSGQLEHVQPWSV"
BASE COUNT 531 a 613 c 696 g 520 t
ORIGIN
1 agcggtgtgg tcctagaaac caggtggtgt tttcctgagg aaatgacatt ttcctctgga
61 tcagagctga ggaaggtgcc tctgtgtgtc ccgtggccgc tgtgacactg accacacacc
121 tggggctgga aaataatact cactctccca cagctctgga gcgcaggagc catgggctga
181 ggccagaatg tttgctccag gagcgtccct cgtggtccgt tcaggtgccc agagttgcgg
241 gccttgcacg ccttgtacgc cttgttccct ggcgcctcct ccttccatgt gggtgtgcag
301 catcccgctc cagggccttc agcctctgcg cccctcatct gctgatgcag gtgatggcat
361 ttagggccca cctgggtact cctaggattc acctttatca ccgcatgagg gagcattccc
421 aggttctagg gattagggat aggactggga ttcctttggg gactgctctc ccgcccacca
481 ctgtgccgga atgtgatgca cacagcggcc agcatataca aaggccccag gaggacctgg
541 ggtggctgga acaggacctg gtgccgggag caggcggggc cggggattcc cgacaaaggc
601 ttgatgtgta cttgaagtga gcaaagggtt ttgaataaac caagaactgg atcagattta
661 tgttttttat agatggggtc ctttctgtgt gaacggattg gagggtcccg gggtgggagc
721 tgaggcccag gaagagggcg ttgcagccgg actgatgtat gggtgggaag gcggccgatg
781 catttctttg ccatttttct ccccgccgag cttgggtcct catggagggc ggatggcaga
841 catttcactc tgggacccga tgcctgtgca tctggaagac ttccccaggt gcctgggtct
901 aagaaccacc atctgccttt gagtagagtt tccataaatg taacattcgc caatggatgg
961 aagatggccg cacctctaaa atcacaggga gcttttcaga agaaaataga atagcacagc
1021 ggttctcacg gactaagctg gcaggggaca gtcccctaac atctcagcta acacctaacg
1081 gtgtctgtgt ccggtgaaag cggcttcagc agggacagtc acagagcagc gtggagtgag
1141 ctggcttgtg gggtcgtctt ttccgtcccc ttctatgggg cctgggagaa gggagcggca
1201 gatggccagg cccccaaaac gggacatcga ggtcacctcc aggtggctgc catggtgggg
1261 ttgcggggga ccacgttcac acccactccg aggacacatc ccggctgctg cacacccttc
1321 acctctgcgg gatgctggga ccgcatgttt gggcgcggtg ggggggcctt gctgcactca
1381 ctcttggggg agctctggga tggtgggcgc gccccgggcc tgggctggag tgactgatct
1441 cttctctgtg accagacctg cgaccgcatc aagcagtccg ccagcggaac caagcggcgc
1501 gtgttcatca tcgagaccat gggcggctac tgtggctacc tggccaacat gggggggctc
1561 gcggctggag ctgatgccgc atacattttc gaagagccct tcgacatcag ggatctgcag
1621 tccaacgtgg ggcacctgac ggagaaaatg aagaccacca tccagagagg ccttgtgctc
1681 agaaatgaga gctgcagtga aaactacacc accgacttca tttaccagct gtattcagaa
1741 gagggcaaag gcgtgtttga ctgcaggaag aacgtgctgg gtcacatgca gcagggtggg
1801 gcaccctctc catttgatag aaactttgga accaaaatct ctgccagagc tatggagtgg
1861 atcactgcaa aactcaagga ggcccggggc agaggaaaaa aatttaccac cgatgattcc
1921 atttgtgtgc tgggaataag caaaagaaac gttatttttc aacctgtggc agagctgaag
1981 aagcaaacgg attttgagca caggattccc aaagaacagt ggtggctcaa gctacggccc
2041 ctcatgaaaa tcctggccaa gtacaaggcc agctatgacg tgtcggactc aggccagctg
2101 gaacatgtgc agccctggag tgtctgaccc agtcccgcct gcatgtgcct gcagccaccg
2161 tggactgtct gtttttgtaa cacttaagtt attttatcag cactttatgc acgtattatt
2221 aacattaata cctaatcggc gagtgcccat ctgccccacc agccccagtg cgtgctgtct
2281 gtggagtgtg tctcatgctt tcagatgtgc atatgagcag aattaaacat ttgcctacaa
2341 ctccaaaaaa aaaaaaaaaa
//