LOCUS BC043147 4022 bp mRNA linear HUM 27-OCT-2006
DEFINITION Homo sapiens zinc finger protein 254, mRNA (cDNA clone MGC:41864
IMAGE:5296940), complete cds.
ACCESSION BC043147
VERSION BC043147.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4022)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4022)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 76 Row: n Column: 24.
FEATURES Location/Qualifiers
source 1..4022
/db_xref="H-InvDB:HIT000052775"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:41864 IMAGE:5296940"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..4022
/gene="ZNF254"
/gene_synonym="BMZF-5"
/gene_synonym="HD-ZNF1"
/db_xref="GeneID:9534"
/db_xref="HGNC:HGNC:13047"
/db_xref="MIM:604768"
CDS 121..2100
/gene="ZNF254"
/gene_synonym="BMZF-5"
/gene_synonym="HD-ZNF1"
/codon_start=1
/product="zinc finger protein 254"
/protein_id="AAH43147.2"
/db_xref="GeneID:9534"
/db_xref="HGNC:HGNC:13047"
/db_xref="MIM:604768"
/translation="MPGPPRSLEMGLLTFRDVAIEFSLEEWQHLDIAQQNLYRNVMLE
NYRNLAFLGIAVSKPDLITCLEQGKEPWNMKRHEMVDEPPGMCPHFAQGLWPEQGMED
SFQKAILRRYGKYGHENLQLRKGCKSVDEYKVNKEGYNGLNQCFTTAQSKVFQCDKYL
KVFYKFLNSNRPKIRHTEKKSFKCKKRVKLFCMLSHKTQHKSIYHREKSYKCKECGKT
FNWSSTLTNHRKIYTEEKPYKCEEYNKSPKQLSTLTTHEIIHAGEKLYKCEECGEAFN
RSSNLTTHKIIHTGEKPYKCEECGKAFIWSSTLTEHKKIHTRKKPYKCEECGKAFIWS
STLTRHKRMHTGEKPYKCEECGKAFSQSSTLTTHKIIHTGEKRYKCLECGKAFKQLST
LTTHKIIHVGEKLYKCEECGKGFNRSSNLTTHKIIHTGEKPYKCEECGKAFIWSSTLT
KHKRIHTREKPYKCEECGKAFIWSSTLTRHKRMHTGEKPYKCEECGKSFSQSSTLTTH
KIIHTGEKPYKCEECGKAFNWSSTLTKHNIIHTEEKPYKCEKCGKAFKQSSILTNHKR
IHTGEKPYKCEECGKSFNRSSTFTKHKVIHTGVKPYKCEECGKAFFWSSTLTKHKRIH
TGEQPYKWEKFGKAFNRSSHLTTDKITHWREILQV"
BASE COUNT 1499 a 657 c 675 g 1191 t
ORIGIN
1 agcgggtctc tcgctgtcgc cggagtccca ggtctgtctt cactgctctg tgtcctctgc
61 tcctagaggc ccagcctctg tggcgctgtt accagcaggt attggagatc cacagctaag
121 atgccaggac cccctagaag cctagaaatg ggactgttga catttaggga tgtggccata
181 gaattctctc tggaggagtg gcaacacctg gacattgcac agcagaattt atatagaaat
241 gtgatgttag agaactacag aaacctggcc ttcctgggta ttgctgtctc taagccagac
301 ctgatcacct gtctggaaca agggaaagag ccctggaata tgaagcgaca tgagatggtg
361 gatgaacccc caggtatgtg tcctcatttt gctcaaggcc tttggccaga gcagggcatg
421 gaagattctt ttcaaaaagc aatactgaga agatatggaa aatatggaca tgagaattta
481 cagttaagaa aaggctgtaa aagtgtggat gagtataagg tgaacaaaga aggttataat
541 ggacttaacc agtgtttcac aactgcccag agcaaagtat ttcaatgtga taaatatttg
601 aaagtcttct ataaattttt aaattcaaac agacctaaga taagacatac tgaaaagaaa
661 tctttcaaat gtaaaaaacg tgtcaaatta ttttgcatgc tttcacataa aacccaacac
721 aaaagcattt atcatagaga gaagtcctac aaatgtaaag aatgtggaaa aacctttaat
781 tggtcctcaa cccttactaa tcataggaaa atttatactg aagagaaacc ttacaaatgt
841 gaagaatata acaaatctcc taagcaactc tcaaccctta ctacacatga aataattcat
901 gctggagaga aactctacaa atgtgaagaa tgtggtgaag cttttaatcg atcctcaaat
961 cttactacac ataagataat tcatactgga gagaaacctt acaagtgtga agaatgtggc
1021 aaagcattta tctggtcctc aacccttact gagcataaga aaattcatac tagaaagaaa
1081 ccctacaagt gtgaagaatg tggcaaagca tttatatggt cctcaacact aactagacat
1141 aagaggatgc acactggaga gaaaccctac aaatgtgaag aatgtggcaa agcttttagc
1201 cagtcctcaa cccttactac acataagata attcatactg gagagaaacg ctacaaatgc
1261 ttagaatgtg gcaaagcttt taagcaactc tcaactctta ctacacataa aataattcat
1321 gttggagaga aactctacaa atgtgaagaa tgcggcaaag gttttaatcg atcttcaaat
1381 cttactacac ataagataat tcatactgga gagaaacctt acaagtgtga agaatgtggc
1441 aaagcattta tctggtcctc aacgcttact aaacataaga gaattcatac tagagagaaa
1501 ccctacaaat gtgaagaatg tggcaaggca tttatatggt cctcaaccct aactagacat
1561 aagaggatgc acactggaga gaaaccctac aaatgtgaag aatgtggcaa atcttttagc
1621 caatcctcaa cccttactac acataagata attcatactg gagagaaacc ctacaaatgt
1681 gaagaatgtg gcaaagcctt taactggtcc tcaactctta ctaaacataa cataattcat
1741 actgaagaga aaccctacaa atgtgaaaaa tgtggcaaag cctttaagca gtcttcaatc
1801 cttactaacc ataagagaat tcatactgga gagaaaccct ataaatgtga agaatgtggc
1861 aaatctttta accggtcttc aacttttact aaacataagg taattcatac tggagtaaaa
1921 ccctacaaat gtgaagaatg tggcaaagca tttttctggt cctcaaccct aactaaacat
1981 aagagaattc atactggaga gcaaccctac aaatgggaaa aatttggcaa agcctttaat
2041 cggtcctcgc acctcaccac agataagata actcattgga gagaaatctt acaagtatga
2101 ataatgtgcc aaagcctaag aaaaccctca attcttaata gatataagat tattcctact
2161 ggagagaaac tacaaacctg agagaggcgc taatgctttt gacagtacct aaaactttaa
2221 agaaaatcat tctgctgaaa aatcctagaa atgtgaagaa tgtgaaaaag cctttaaatg
2281 attgtcacac ttgattgtag gtaagataat tcatactgga gaaaactacc agtgtgaaca
2341 acgtggccaa gcttcgacaa tgctcacacc ctattgcaca ggaaagcatt tatacttgag
2401 aagaaatgta caaatattgg caaagtaaaa aatccattaa cacctgctca catcttactc
2461 aaaattgtag agttcatagt aaataaaagc attaaaattc taattactct cagaagatct
2521 gtcagaaagt atgtctttaa agtatagaag agcatttatt ttgaaaaaaa cattacacat
2581 atgaagagga ttgtaatatc tttacttgta ccacagatct tattgtacac attttatact
2641 agagaaaaac cctcaggcag ttgttaaaat tttgttgaac atcagggagt ttaagaaaac
2701 cctgcaagta taatgaattt ggaaaaacat tttttcaaaa actacaaatt ataaaacacc
2761 aaagtgttca tactaaaata tatttttgca gatacattaa atatgaaaga tattcaatcc
2821 aaaattaagt ctatgtaaat atcagggaat aattcacagt agaaatatct agggcattca
2881 agctttagac attacactaa atcagagtgc tgagtataga aaataataca aacagatttg
2941 tctaaacatt tgtatataac tttaaaaata gaatattttt tggagggtta taattacatt
3001 caaagtactt ttttttgaaa atacagattt tttttaaaag tgaataatgt gttcaactct
3061 taaattcatg ctgtttcatc attgctggtg tattcatatg tgaaagcatg tgactaattg
3121 ctgcataaaa gatatgagat tcttttttat taggcattat ttatgacctt ttctatgaaa
3181 agataaggac attaaaatgt aagatgcgtg aggaaaattt aggtagagag gctctttgtg
3241 gttaacttat aatattgagt gatgcatgag gtaggtgttc agaataatat tcctctgcat
3301 tattatgaat gaaaagcatt cttaatttta gttaaaatta agttagtcat atgttatttt
3361 attaattgta cttctatgaa ataatatgca gtctattttt aaattataaa ttatgtgtga
3421 acttagcttt tcaattcaac atttttaaca tattaaatac tattgtgaat tcaatgaagt
3481 gttcttatgc cactaacttt aacctattcc cttactcaag gatgtaggta aaagatggta
3541 acaatacact atttggtaag ataatgtact gacatctcta gcaatctttt ttgccagtgg
3601 ctttaaattg ccaataagtt aaagaatatt gttcctatgg gttaaatttt tattcttatt
3661 ttcacattta aatttatttt tcttaatttt tgtggataca taatatgtgt atatatgtat
3721 gccatatatg gtatattttg atgcaggcat actctatata ataatcacat tagaggaaat
3781 gagatatcca ttacctctag catttattct ttttattaca agcaattcaa ttgtacactt
3841 ttagttattt ttaaatttac aatgttattg attacagggt catttttatg gtcataataa
3901 aaaattttat acaaacgtgt aaaatctata catttctgag ttctgaataa atatttttaa
3961 aaattttaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaagaa aaaaaaaaaa
4021 aa
//