LOCUS BC042967 1737 bp mRNA linear HTC 27-OCT-2008
DEFINITION Homo sapiens nudix (nucleoside diphosphate linked moiety X)-type
motif 12, mRNA (cDNA clone IMAGE:5288353), with apparent retained
intron.
ACCESSION BC042967
VERSION BC042967.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1737)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1737)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 76 Row: e Column: 1
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..1737
/db_xref="H-InvDB:HIT000097440"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5288353"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
BASE COUNT 508 a 324 c 401 g 504 t
ORIGIN
1 agcggaggac tgcatccggc tccaggaaaa gcgagtggga tatcccaatc tttggactgc
61 atcatggttg cctctactgt ggtcaccttt gggttagtag aagcagtggg gagttagtcg
121 tctcattgcc tcctctgggg gcggtgacca cttccctggg ctctttggtt cccgcgctgc
181 cctgcgtggc cctgctgagt tgtgtggcgg agcctcgtag tggtttggtg ggcgcaggcg
241 cgggagccac ggacgcattt gcaggggctc ccgcgacagg gcggaggtgc ggcggtactg
301 aggtcgtaga gtttcctgcc caagctgaga tggggaaaag gaagcgctac ttagggtgtg
361 atttcacctc gaaagaagga atctcacagt agtggcaaga aagtaaaata tcttaaggca
421 ttttaccatt ttcagagacc gtgcacgggt ggcacttaat tggtcttgag tgcccaggga
481 gtggatgaaa ttcgttaatt gatggtcagt gatttcagtg acagagcgat atttaaggtc
541 ctgtcctgtc ccattcggtc tgtgtgagca tgcggaagtc atgggccccg ggttacatgt
601 cagtaaaagt ggatgttggt ttgttaaaaa tttatgtccc tttacatcta atattctttt
661 aaatgatttc tcggaatagt ccttgagctt cttggaaaac aagggcagca ctttattctg
721 ccttcaaatc tttaccttct ataacctgtc aatgagaatt gaaaaagtaa atcaaacagt
781 agaattgggt gttagacttt atgtgcttct ctggaatgaa taatggtact atttgtagat
841 ggcttttctg ctgagaaagc tagagggaaa agtgtacact ttccacttcc catctccaca
901 gaatagcata tgcataagca ttgccctgga ggtagtgaat gacgctgtat ttttgaagga
961 caattttgca gttacctggc gcggcctgtg agaatgtgag ggagtgacgg tgaccccaga
1021 acatgagaca gtgaaatatt attcaaacta aacctagctg aaaaaactat aatatgggtt
1081 tttggaaaat aaacttaaga gaaagacaat ttggaaggga gatcagtaca ggagctgtac
1141 agcagtgctt caaaataaag tcgtgaaaat ttgtagcttt tgttatgcat agtattttta
1201 acgtatgtag aaatttcaat atgaaaggaa cagcgaagta aattctagaa taaatcaaaa
1261 attattctgt catgtagata ttacttctgg taatttaatt tctaaacaga tttccactgt
1321 taggtttcat ccaagtgttt ccatgactgt gagcagtttt aacctattta taagtagcag
1381 aaagacacaa ataggaaagg tgaacagctc caaaatgaga caattaatct ttactccttg
1441 ttttccctaa attttgttca tactattcct gctatgcaat tcatcagcca gatccccctt
1501 tcagaaccca ggagacagca gctatcaaaa actatgggct ataacctttc tgtcttttta
1561 gcttaaaaat cttattgctt agaatgatag aaatgttgtt agaatcccaa atcttttctt
1621 aatagcattt catagaaaga agaattatac cttaaaaaaa aatactttga gaagttcaca
1681 gacagttgaa tcatgaacca ttttcaccat cccccgccgc caaaaaaaaa aaaaaaa
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