LOCUS BC042966 2321 bp mRNA linear HTC 27-OCT-2008
DEFINITION Homo sapiens cDNA clone IMAGE:5287754, with apparent retained
intron.
ACCESSION BC042966
VERSION BC042966.2
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2321)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2321)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC042966.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 76 Row: c Column: 21
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..2321
/db_xref="H-InvDB:HIT000097439"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5287754"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
BASE COUNT 664 a 444 c 431 g 782 t
ORIGIN
1 gtgggctggt tatcaggttc gtcaatattt tattttacta aatactccct gctcttttgg
61 gagttggcaa acaacagcct gcaagccaaa tctggcccat caccctgctt ttgtaaataa
121 agttttattg gaacaaggcc atgttcactc attctcatat ccatggctgc ttttgcaaca
181 ggttgagtag ttgcaacaga gaccttacgg ctggcaaagc ctgaaatttt ctaccaaaaa
241 atttacagaa aaagtttgct gacctctact ctagaagatc agttgataaa atacaacaac
301 gttttcatgc ccatcattat ttttcctatt tcaatgaata gcatggaaac caaggtgaag
361 taattgaact gaagggattt ctgaatgaag gattcatgtg ttcatatgtt tagacaaaat
421 tactcattag actagttttt agggagtaat ttgctgctgt taaactacct cttcatatga
481 ataatttttt aaaagagcag acacatatat acttaaatag gaaataattt tgaatttaat
541 aacttcatgt tcatttttaa aattgtggca aaatatgcac aatataaaat ttgccatttt
601 agccactttt aagcattaag ttcattggca ttaagtatat ttgcattgtt atgcaaacat
661 caccaccatc tgtttctaga gctttttcat tctgctatat tgaaacccat taaacaataa
721 ctctccatcc tcccgttccc ccactgtcct acattctgtc tttatgaatt tgactactct
781 aggtaccaca tataagtgga atcataatgt atttgttctt ttgtatctgg cttatttcac
841 ttagcaaaat ttcctcaggg ttcattcatg ttgtagagca tgtatcagaa tttcattcct
901 ttttgtggat gaatagtatt ctgtgtcatg gatataccat gctttgttta tccattcatc
961 tgctgatgga catttgggtt gtttccacct cttgaccatt gtgaataatg ctgctgggaa
1021 cattggtgta caaatattta ttagagttcc tgctttaaat ccttttgtgt ttatactcag
1081 aagtggaatt actggatcaa atggtaattc tatgtttaat ttattgagga actgccatgg
1141 aattttcagc atctgctgcc ctattttatt atacttcccc actagcaatg cacaagggtt
1201 ccaatttttt cacaaccaca ctaacactta ttttattaac actttttttt tgagatggag
1261 tctcgctctg ttgccaggct ggagtgcagt ggtgctatct cggctgactg caatttctgc
1321 ctccagggtt caagcgattc ccgtgtctcg gcctcccgag tggctgggac tgcaggtgca
1381 tgccaccacg cctaattttt tttttttttt gtattttggt ggggatgggg tttcactgtg
1441 ttggccagta tggtcttcat ctcctgacct cgtgatctgc ctgcctcggc ctcccaaagt
1501 gctgggatta caggtgtgag ccaccgcacc tggccaacac ttatttttat aacacttatt
1561 ttatattttc ttgatagtag ccaccctaat gggtgtgaag tggtatcttg ttgtggcttt
1621 gatttgcatt tccctaataa ttagtgatgt tgaacatctt ttcatgtgct tattggccat
1681 ttgtacatca tctttggaga aatgtctatt caagttcttt gccttttttt ttaattggat
1741 tgttttgttt cttaaaaaca aaaaaagaac aaagctggag gactcacgct tccagatctc
1801 aaaacttact acaaagctac agtaatcaaa acagtgtggt actgatataa agacggacat
1861 atagacaaat ggaatagaat agaaagccta gaaataaagc catgcacata tggtcaaatg
1921 atttttgaga agggtgctaa gaccattcag tagggaaagg atagtttttt caacaaatgg
1981 cactgggaaa actggatatc cacatacaaa agaaaaaagt tggcttattt cttagccaac
2041 ttttttctta gttaccttat ttcacttagc aagtgctaag tgaaataagg taagccagac
2101 ccttacctaa caacatataa aaattaaccc aaaatgcatc aaatacctaa agataagagc
2161 tcttgttttc ttagaataaa atggggaagc tgggcgtggt ggcttgcacc tgtaatttca
2221 gcactttgga aggcccaggt gggtggattg cttgacccca ggagttcgag accagcctgg
2281 acaacatggt gaaaccccgt ctctacggaa aaaaaaaaaa a
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