LOCUS BC042951 2637 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens transcription elongation regulator 1-like, mRNA (cDNA
clone MGC:43915 IMAGE:5275182), complete cds.
ACCESSION BC042951
VERSION BC042951.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2637)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2637)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 75 Row: h Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 28372558.
FEATURES Location/Qualifiers
source 1..2637
/db_xref="H-InvDB:HIT000052765"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:43915 IMAGE:5275182"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2637
/gene="TCERG1L"
/db_xref="GeneID:256536"
/db_xref="HGNC:HGNC:23533"
CDS 215..1852
/gene="TCERG1L"
/codon_start=1
/product="transcription elongation regulator 1-like"
/protein_id="AAH42951.1"
/db_xref="GeneID:256536"
/db_xref="HGNC:HGNC:23533"
/translation="MVPGSAGLLRLSAGVVVPPVLLASAPPPAAPLLPGLPGWPAPSE
PVLPLLPLPSAPDSAAAAAAHPFPALHGQWLFGGHSPSLGLPPSSTVELVPVFPHLCP
SALATPIGKSWIDKRIPNCKIFFNNSFALDSTWIHPEESRFFHGHEKPRLLANQVAVS
LSRPAPASRPLPTVVLAPQPIPGGCHNSLKVTSSPAIAIATAAAAAMVSVDPENLRGP
SPSSVQPRHFLTLAPIKIPLRTSPVSDTRTERGRVARPPALMLRAQKSRDGDKEDKEP
PPMLGGGEDSTARGNRPVASTQVPGSPWCVVWTGDDRVFFFNPTMHLSVWEKPMDLKD
RGDLNRIIEDPPHKRKLEAPATDNSDGSSSEDNREDQDVKTKRNRTEGCGSPKPEEAK
REDKGTRTPPPQILLPLEERVTHFRDMLLERGVSAFSTWEKELHKIVFDPRYLLLNSE
ERKQIFEQFVKTRIKEEYKEKKSKLLLAKEEFKKLLEKSKVSPRTTFKEFAEKYGRDQ
RFRLVQKRKDQEHFFNKFILILKKRDKENRLRLRKMR"
BASE COUNT 610 a 763 c 715 g 549 t
ORIGIN
1 agcgggagtt cgctccggag ccgcgccgcc gccggcccag catctcgggc gcccgccgcc
61 cccgccgccg ccgtcagcgc ggggatgtag gatgcaggcg ggcgccaggt tccagcggcg
121 gcggcggcag ctgcagcagc agcagccccg gcggcggcag cctctcctct ggccgatgga
181 cgcagagccg ccgccgccgc cgccctgggt ctggatggtg ccgggctcgg ccgggctgct
241 ccggctcagc gcgggggtcg tggttccccc ggtgctgctc gcctcggccc cgccgcccgc
301 ggccccgctg ctccccggtc tccccggctg gccggccccg agcgagccgg tgctcccgct
361 gctgccgctg ccctctgcgc cagactccgc cgccgccgcc gccgcgcacc ccttccccgc
421 gctccacggg cagtggctgt ttggtggcca ttctccgtcc ctaggactgc ccccctcttc
481 cacagtggag ctggtgcccg tcttcccaca tctctgccct tctgctcttg caacccctat
541 tgggaaaagt tggatagaca aaaggattcc taactgtaag atctttttta ataattcctt
601 tgctctggac tcaacgtgga tacatcctga ggagtcaagg tttttccatg ggcatgaaaa
661 gcctcgtttg ctggcaaatc aagtagctgt gtctctgtcc aggccggctc ctgcctccag
721 gccgctcccc acggtggtgt tagcacctca gcccatccca ggtggctgcc ataacagcct
781 taaggtgacc agcagccccg ccattgccat cgccaccgcc gccgccgctg ccatggtctc
841 cgtggaccct gagaacctcc ggggcccgtc cccctccagc gtgcagccgc gccacttcct
901 gaccttggca cccatcaaaa tacccctccg gacgtccccc gtctcagata caaggacaga
961 gcggggccga gtggcccgcc ctcctgccct gatgctgcgg gcccagaaga gccgggatgg
1021 agacaaagaa gacaaggagc ctccaccgat gctgggggga ggagaggaca gcacagccag
1081 aggcaacagg ccagtggcct ccacccaggt gcccggatcc ccctggtgtg tggtctggac
1141 gggcgatgac cgagttttct tcttcaaccc aacgatgcac ctgtctgtct gggagaagcc
1201 catggacctg aaggaccgcg gagacctcaa caggatcatt gaggacccgc cccacaaacg
1261 caagctggag gcaccagcaa ctgacaacag cgatgggtcc agttctgaag acaacaggga
1321 agaccaagat gtgaaaacca agaggaaccg gaccgaaggc tgcgggagtc ccaagccaga
1381 ggaggcaaag agagaggaca aaggcacaag gacgccgccc ccgcagatcc tcctgcctct
1441 ggaggagcgt gtgacccact tccgagacat gctgctggag agaggggtat cagcattttc
1501 tacctgggag aaagaattac acaaaatcgt gtttgaccca cgctatctcc tgctcaactc
1561 tgaggaacga aagcagatat ttgaacagtt tgtcaagaca agaataaaag aagaatacaa
1621 ggaaaagaaa agtaaattgc tgctagccaa agaagaattc aagaaacttc tagagaaatc
1681 taaagtgtct cccaggacca cgtttaagga gtttgcagag aaatacggcc gggatcagag
1741 gttccgactt gttcaaaaaa gaaaggacca ggagcatttt ttcaacaaat tcatacttat
1801 tcttaagaaa cgggacaagg aaaacagact aaggctgcgg aaaatgagat gagtttgtga
1861 aaaaatgcaa taagcccggg ggttgaccct gggcgtgccg ggggcgaggg ggtcacggtg
1921 gagacggaca cgggcgtggg gcggccgaga cctgcacggc ccagcgggca ccggcactgc
1981 ggggtcttcg ttctcagagg attactgttt catattgaag ctctctcttt tgtacattca
2041 gagtttgatg catttctaat caccgtgata cgtcgatccc ttaattgttt taattatgca
2101 aattacttgt aatatacaca aattatcaat ccactgcagg actgtgggga agcaggaacg
2161 ggagcctctg taacaatctc aaggcatttg tgtcatcacc taagacgatt ggcgaaaact
2221 tttctgaaaa cctttgtgaa ttacttcgtt cctccaggat tcccgcagtg ttgaggaatt
2281 ccttactctg tccctaggtc tcagtctcgt ttctgagtag cagcaatagg gttttcatca
2341 ttcatcatag tgacaactgt gagcattcca cacctggacc gtggatcact tacaggtttc
2401 caagggtggc cgcgcgttcc tcccagaggg gcgtcccggc ctggagcagg gagccgtgtt
2461 ggttgccacc ggtcctactt caaaagaatt attttgtaca aaatcatcat attaatattt
2521 gagttatttt tattgtatgc ccggagtttg catgagattt tttctcatca cctttgtata
2581 aaaaattttt aatttttttt aatcaataaa tattttaaac caaaaaaaaa aaaaaaa
//