LOCUS BC042918 2046 bp mRNA linear HUM 11-AUG-2006
DEFINITION Homo sapiens apolipoprotein L, 3, mRNA (cDNA clone MGC:52206
IMAGE:5932779), complete cds.
ACCESSION BC042918
VERSION BC042918.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2046)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2046)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Daniel McVicar, DBS/NCI
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 44 Row: p Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22035643.
FEATURES Location/Qualifiers
source 1..2046
/db_xref="H-InvDB:HIT000097416"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:52206 IMAGE:5932779"
/tissue_type="Blood, natural killer cell"
/clone_lib="NIH_MGC_106"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2046
/gene="APOL3"
/gene_synonym="APOLIII"
/gene_synonym="CG12-1"
/db_xref="GeneID:80833"
/db_xref="HGNC:HGNC:14868"
/db_xref="MIM:607253"
CDS 154..1149
/gene="APOL3"
/gene_synonym="APOLIII"
/gene_synonym="CG12-1"
/codon_start=1
/product="apolipoprotein L, 3"
/protein_id="AAH42918.1"
/db_xref="GeneID:80833"
/db_xref="HGNC:HGNC:14868"
/db_xref="MIM:607253"
/translation="MDSEKKRFTEEATKYFRERVSPVHLQILLTNNEAWKRFVTAAEL
PRDEADALYEALKKLRTYAAIEDEYVQQKDEQFREWFLKEFPQVKRKIQESIEKLRAL
ANGIEEVHRGCTISNVVSSSTGAASGIMSLAGLVLAPFTAGTSLALTAAGVGLGAASA
VTGITTSIVEHSYTSSAEAEASRLTATSIDRLKVFKEVMRDITPNLLSLLNNYYEATQ
TIGSEIRAIRQARARARLPVTTWRISAGSGGQAERTIAGTTRAVSRGARILSATTSGI
FLALDVVNLVYESKHLHEGAKSASAEELRRQAQELEENLMELTQIYQRLNPCHTH"
BASE COUNT 587 a 466 c 566 g 427 t
ORIGIN
1 aggtgggatc cacacagctc agaacagctg gatcttgctc acactctttc aagagaagct
61 tccttgggtt aagaaaaaaa acgaaccctt ccagtcaggt cagtgactgg agagctccaa
121 ggaaagtctc tcagtgacct ggctgctggc accatggact cagaaaagaa acgctttact
181 gaagaggcca ccaaatactt ccgggagaga gtcagcccag tgcatctgca aatcctgctg
241 actaacaatg aagcctggaa gagattcgtg actgcggctg aattgcccag ggatgaggca
301 gatgctctct acgaagctct gaagaagctt agaacatatg cagctattga ggacgaatat
361 gtgcagcaga aagatgagca gtttagggaa tggtttttga aagagtttcc ccaagtcaag
421 aggaagatcc aggagtccat agaaaagctt cgtgcccttg caaatggtat tgaagaggtc
481 cacagaggct gcaccatctc caatgtggtg tccagctcca ctggcgctgc ctctggcatc
541 atgtcccttg ctggtcttgt tttggcacca tttacagcag ggacgagtct ggcccttact
601 gcagctgggg tagggctggg agcagcgtct gctgtgactg ggatcaccac cagcatcgtg
661 gagcactcat acacatcatc agcagaagct gaagccagca ggctgactgc aaccagcatt
721 gaccgattga aggtatttaa ggaagttatg cgtgacatca cacccaactt actttccctt
781 cttaataatt attacgaagc cacacaaacc attgggagtg aaatccgtgc catcaggcaa
841 gccagagcca gggcccgact ccctgtgacc acctggcgaa tctcagctgg aagtggaggt
901 caagcagaga gaacgattgc aggcaccacc cgggcagtga gcagaggagc ccggatcctg
961 agtgcgacca cttcaggcat cttccttgca ctggatgtgg tcaaccttgt atacgagtca
1021 aagcacttgc atgagggggc aaagtctgca tctgctgagg agctgaggcg gcaggctcag
1081 gagctggagg agaatctaat ggagctcact cagatctatc agcgtctgaa tccatgccat
1141 acccactgac cccagaccag tgcagccagc aggggaggtg agccatacac aggccacgac
1201 aaaatgcagg cattttatta gggggataaa gagggcaagg taaagtttat ggagctgagt
1261 gttagtgact ttggcatttc tgtagctgag cacagcaggg gaggggttaa tgcagatggc
1321 aagtgcacca aggagaaggc aggaatgctg gagcctggaa taagggagga gaggggactg
1381 gagagtgtgg ggaataggaa gaagaaattt cctttagact aacgaatata ttggggggag
1441 gaatagaggg gaggtgtgca ggaaccagca atgagaaggc caggaaaaga aagagctgaa
1501 aatgcagaaa gccgaagagt tagaactttt ggatacagca gaagaaacag cggctccact
1561 accgacctgc ccccggttcg atgtccttcc aagaatgaag tctttccctg gtgatggtcc
1621 cctgccctgt ctttccagca tccactctgt cttgtcctcc tggaagtgta tctcagtcag
1681 ccagtggctt cttgatgatg gcggtggagg tggtggttgt agtgtgatgg atccccttta
1741 ggttatttag gggtatatgt cccctgcttg aaccctgaag gccaggtaat gagccatggc
1801 cattgtcccc agctgaggac caggtgtctc taaaaaccca aacatcctgg agagtatgcg
1861 agaacctacc aagaaaaaca gtctcattac tcatatacag caggcaaaga gacagaaaat
1921 taactgaaaa gcagtttaga gactggggga ggccggatct ctagagccat cctgctgagt
1981 gccctgtgtg taagtcctaa taaactcacc tactcaccaa aaaaaaaaaa aaaaaaaaaa
2041 aaaaaa
//