LOCUS BC042910 1035 bp mRNA linear HUM 30-SEP-2003
DEFINITION Homo sapiens ras responsive element binding protein 1, mRNA (cDNA
clone IMAGE:5478977), partial cds.
ACCESSION BC042910
VERSION BC042910.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1035)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1035)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (06-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC042910.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 44 Row: l Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 19923152.
FEATURES Location/Qualifiers
source 1..1035
/db_xref="H-InvDB:HIT000097413"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5478977"
/tissue_type="Brain, astrocytoma, grade IV"
/clone_lib="NIH_MGC_98"
/lab_host="DH10B"
/note="Vector: pOTB7"
gene 1..>1035
/gene="RREB1"
/gene_synonym="FINB"
/gene_synonym="LZ321"
/gene_synonym="RREB-1"
/db_xref="GeneID:6239"
/db_xref="MIM:602209"
CDS 101..>1035
/gene="RREB1"
/gene_synonym="FINB"
/gene_synonym="LZ321"
/gene_synonym="RREB-1"
/codon_start=1
/product="RREB1 protein"
/protein_id="AAH42910.1"
/db_xref="GeneID:6239"
/db_xref="MIM:602209"
/translation="MMSAVMSVGKVTENGGSPQGIKSPSKPPGPNRIGRRNQETKEEK
SSYNCPLCEKICTTQHQLTMHIRQHNTDTGGADHSCSICGKSLSSASSLDRHMLVHSG
ERPYKCTVCGQSFTTNGNMHRHMKIHEKDPNSATATAPPSPLKRRRLSSKRKLSHDAE
SEREDPAPAKKMVEDRQSGDLEKKADEVFHCPVCFKEFVCKYGLETHMETHSDNPLRC
DICCVTFRTHRGLLRHNALVHKQLPRDAMGRPFIQNNPSIPAGFHDLGFTDFSCRKFP
RISQAWCETNLRRCISEQHRFVCDTCDKAGKKKKK"
BASE COUNT 295 a 278 c 255 g 207 t
ORIGIN
1 gttttatagc agaggcttct tagaagctta aacccctgtc ccaatgacgt caagttcgcc
61 cgctggcttg gaaggttcag acctatcttc catcaacacc atgatgtcgg cggtcatgag
121 tgtagggaag gtcacagaga atggcgggag cccccagggg atcaagtccc cctcgaagcc
181 tccaggacca aatcggattg gcagaaggaa ccaggaaacg aaagaggaga agtcttccta
241 taactgcccc ctgtgtgaga agatttgcac tacccagcac cagctgacca tgcacattcg
301 ccagcacaac acagacactg gaggagccga ccactcatgc agcatctgcg gaaagtcact
361 gagctcggcc agctccctcg atcgccacat gctggtgcac tctggcgaga ggccttacaa
421 gtgcactgtg tgtggccagt catttaccac caatgggaac atgcacagac atatgaagat
481 ccatgagaag gaccctaaca gtgccacagc cacagcccct ccatctcctc tgaaacgtag
541 gcgattgtcc tccaagagga aactgagtca cgatgccgag tcagagagag aagacccagc
601 accagctaaa aagatggtag aagacaggca gtcaggtgac ttggagaaga aagctgatga
661 agtctttcac tgcccagtat gtttcaagga gtttgtttgc aagtatggac tggagaccca
721 catggagacc cattcagata acccactaag atgtgacatt tgttgtgtca cctttcgaac
781 acatcgagga ctgctgcgtc acaacgcgct tgtccacaaa caacttccca gggatgcaat
841 gggcagacct ttcatacaga acaacccttc aattcctgct ggcttccacg acttaggatt
901 cacggacttc tcctgtagga agtttcctcg catttctcag gcctggtgcg aaacaaacct
961 gcggaggtgc atcagcgagc aacaccgttt tgtctgcgac acctgtgaca aggcgggaaa
1021 aaaaaaaaaa aaaaa
//