LOCUS BC042897 3049 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens nuclear receptor subfamily 2, group F, member 2, mRNA
(cDNA clone MGC:35309 IMAGE:5177487), complete cds.
ACCESSION BC042897
VERSION BC042897.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3049)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3049)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 51 Row: n Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31377723.
FEATURES Location/Qualifiers
source 1..3049
/db_xref="H-InvDB:HIT000052753"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:35309 IMAGE:5177487"
/tissue_type="Brain, Lung, Testis, adult, pooled whole"
/clone_lib="NIH_MGC_115"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3049
/gene="NR2F2"
/gene_synonym="COUP-TFII"
/gene_synonym="COUPTFB"
/gene_synonym="SVP40"
/db_xref="GeneID:7026"
/db_xref="HGNC:HGNC:7976"
/db_xref="MIM:107773"
CDS 582..1826
/gene="NR2F2"
/gene_synonym="COUP-TFII"
/gene_synonym="COUPTFB"
/gene_synonym="SVP40"
/codon_start=1
/product="nuclear receptor subfamily 2, group F, member 2"
/protein_id="AAH42897.1"
/db_xref="GeneID:7026"
/db_xref="HGNC:HGNC:7976"
/db_xref="MIM:107773"
/translation="MAMVVSTWRDPQDEVPGSQGSQASQAPPVPGPPPGAPHTPQTPG
QGGPASTPAQTAAGGQGGPGGPGSDKQQQQQHIECVVCGDKSSGKHYGQFTCEGCKSF
FKRSVRRNLSYTCRANRNCPIDQHHRNQCQYCRLKKCLKVGMRREAVQRGRMPPTQPT
HGQFALTNGDPLNCHSYLSGYISLLLRAEPYPTSRFGSQCMQPNNIMGIENICELAAR
MLFSAVEWARNIPFFPDLQITDQVALLRLTWSELFVLNAAQCSMPLHVAPLLAAAGLH
ASPMSADRVVAFMDHIRIFQEQVEKLKALHVDSAEYSCLKAIVLFTSDACGLSDVAHV
ESLQEKSQCALEEYVRSQYPNQPTRFGKLLLRLPSLRTVSSSVIEQLFFVRLVGKTPI
ETLIRDMLLSGSSFNWPYMAIQ"
BASE COUNT 775 a 797 c 724 g 753 t
ORIGIN
1 agccccggcg cctataaatc gcattccctc ccgcgccccc ctttttagca tatttgatca
61 ctttgattct ctgttctttt ctctccgcgg tgtgtgtgtg cgtgcgcgcg tgtgtgtttt
121 cttcttctcc tcctcctctc cccgagttgc ctcctttctc cgggtgccgt actgcctttt
181 ttcccctctt tcattctttc tctccgtctt tttctccccc ctctgcgcac gaaggatgtg
241 cttctaggtg gtgatctgcc ctcctctctc tcttttatca tttctccccc gccgccggcg
301 agttgactct ttccctatgt gtgtgaggcg gcggcggcag cagcagcagc agcggctccg
361 gcggcggcag cagcggcagc agcgacttca gcggcggcgg cggcgctaga cgcagcggct
421 ccgggcccga cccggcggct tcggggcgcc ctcccgcgcc ctcttgcacc ctcgcacaca
481 caaaaggcgg cgcgccggag cccgagaccc ggggagccgc cgccgccccg ccgccgcccg
541 cagccagggg agcaggaagt ccggacgcag cccccataga tatggcaatg gtagtcagca
601 cgtggcgcga cccccaggac gaggtgcccg gctcacaggg cagccaggcc tcgcaggcgc
661 cgcccgtgcc cggcccgccg cccggcgccc cgcacacgcc acagacgccc ggccaagggg
721 gcccagccag cacgccagcc cagacggcgg ccggtggcca gggcggccct ggcggcccgg
781 gtagcgacaa gcagcagcag cagcaacaca tcgagtgcgt ggtgtgcgga gacaagtcga
841 gcggcaagca ctacggccag ttcacgtgcg agggctgcaa gagcttcttc aagcgcagcg
901 tgcggaggaa cctgagctac acgtgccgcg ccaaccggaa ctgtcccatc gaccagcacc
961 atcgcaacca gtgccagtac tgccgcctca aaaagtgcct caaagtgggc atgagacggg
1021 aagcggtgca gaggggcagg atgccgccga cccagccgac ccacgggcag ttcgcgctga
1081 ccaacgggga tcccctcaac tgccactcgt acctgtccgg atatatttcc ctgctgttgc
1141 gcgcggagcc ctatcccacg tcgcgcttcg gcagccaatg catgcagccc aacaacatca
1201 tgggtatcga gaacatttgc gaactggccg cgaggatgct cttcagcgcc gtcgagtggg
1261 cccggaacat ccccttcttc cccgacctgc agatcacgga ccaggtggcc ctgcttcgcc
1321 tcacctggag cgagctgttt gtgttgaatg cggcgcagtg ctccatgccc ctccacgtcg
1381 ccccgctcct ggccgccgcc ggcctgcatg cttcgcccat gtccgccgac cgggtggtcg
1441 cctttatgga ccacatacgg atcttccaag agcaagtgga gaagctcaag gcgctgcacg
1501 ttgactcagc cgagtacagc tgcctcaagg ccatagtcct gttcacctca gatgcctgtg
1561 gtctctctga tgtagcccat gtggaaagct tgcaggaaaa gtctcagtgt gctttggaag
1621 aatacgttag gagccagtac cccaaccagc cgacgagatt cggaaagctt ttgcttcgcc
1681 tcccttccct ccgcaccgtc tcctcctcag tcatagagca attgtttttc gtccgtttgg
1741 taggtaaaac ccccatcgaa accctcatcc gggatatgtt actgtccggc agcagtttta
1801 actggccgta tatggcaatt caataaataa ataaaataag aagggggagt gaaacagaga
1861 aagaaaaggc aaaagactgg tttgtttgct taatttcctt ctgttaagaa aggatataaa
1921 aggatgttac aagtttgcta aaagaagaga ggggaagaat ttaatggact gtgaatttca
1981 aaaaaaaaaa aaagactgtc aaatgaactt ttacagaatg cattaaaaaa aaaaaaactc
2041 ctgtgtcggt cagaacaact tgctacttat catttttgta taaaaaggaa attagtcttt
2101 ttcttttttt ggtaaatttt tgaaaaatat tgctaaaagt gcatttaagg agattgggag
2161 acaattagca gaatggagaa agtaagtctt ttttttttcc aaattattaa ttgtcctgtg
2221 tctatgtacc tctagctgtt cttttttgta cttttctggt tccaaaccag tttattctgt
2281 ggttctataa taagttttga tataatcttg gcttcttaaa aactgtgtat cattaaaata
2341 tatgttctgc aagaattaaa actgagtcca tgaaaatacc ataggaagac ataaaacttt
2401 aaaaggcaac tcaaagatga tggaaacgca cttacaagtg gtgaccaaaa tttttaggtg
2461 aagtcgagca ctctaattag agaactggag gaaccacata taacacttaa cttcccctac
2521 cctgcccctc cccaaaagaa accatgacaa acctagcttt taaaaaatat tttaagaaag
2581 agaatgaact gtggaattta ttggcagcca aggaatgtgt ccaagacaca tgctgaggtt
2641 ttgaataaaa agtgaacttt tgtaatttga attgggtccc gcttagttct tgaattgtta
2701 tgaaaatcct atatctgttt gtatatttgc aaaccctttg tattataatt gttgatattt
2761 tcccttttta aaaaatacca ttgaaatcag catgacaaaa ataacactgt tggcacttat
2821 aggtaacgtg attgattcag tatcttagag tttacagttt gtgttttaaa aaaactgaag
2881 gtttttcttt taagtgcaac atttctgtat actgtaaaag ttataataac tgaactgttt
2941 ggtcgagtct ttgtgtgtta tattccaagg aaaattgaaa gtattcagaa attaaaatat
3001 tatttgatat ctgaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaa
//