LOCUS BC042850 1159 bp mRNA linear HUM 07-AUG-2007
DEFINITION Homo sapiens splicing factor, arginine/serine-rich 18, mRNA (cDNA
clone IMAGE:5267499), partial cds.
ACCESSION BC042850
VERSION BC042850.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1159)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1159)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 91 Row: a Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 18699723.
FEATURES Location/Qualifiers
source 1..1159
/db_xref="H-InvDB:HIT000097375"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5267499"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..>1159
/gene="SFRS18"
/gene_synonym="bA98I9.2"
/gene_synonym="DKFZp564B0769"
/gene_synonym="HSPC306"
/gene_synonym="RP11-98I9.2"
/gene_synonym="SRrp130"
/db_xref="GeneID:25957"
/db_xref="HGNC:HGNC:21222"
CDS 352..>1159
/gene="SFRS18"
/gene_synonym="bA98I9.2"
/gene_synonym="DKFZp564B0769"
/gene_synonym="HSPC306"
/gene_synonym="RP11-98I9.2"
/gene_synonym="SRrp130"
/codon_start=1
/product="SFRS18 protein"
/protein_id="AAH42850.1"
/db_xref="GeneID:25957"
/db_xref="HGNC:HGNC:21222"
/translation="MWDQGGQPWQQWPLNQQQWMQSFQHQQDPSQIDWAALAQAWIAQ
REASGQQSMVEQPPGMMPNGQDMSTMESGPNNHGNFQGDSNFNRMWQPEWGMHQQPPH
PPPDQPWMPPTPGPMDIVPPSEDSNSQDSGEFAPDNRHIFNQNNHNFGGPPDNFAVGP
VNQFDYQHGAAFGPPQGGFHPPYWQPGPPGPPAPPQNRRERPSSFRDRQRSPIALPVK
QEPPQIDAVKRRTLPAWIREGLEKMEREKQKKLEKERMEQQRSQLSKKKKK"
BASE COUNT 382 a 257 c 273 g 247 t
ORIGIN
1 gaaagcgttg gagaggtgtt accggaacgg cggcgacaag ggtgttcccg aactagagtg
61 gggcatacat aatcttgctg ctatgcttcg aagctgtagt ctgaatcaac ctaagtttta
121 aacagaaggt gaacctctga gcatacagga aaggatcaat ctagaaggat tcatttagta
181 aacatttatt aaatgcctgc tatgaactaa gccttgggat acaaaaataa agaagaaacc
241 atgccctggt tatgtgagtc actggttctt gaacagggtt gtgtatcagt gttggaataa
301 agtacaaaga tattagactt atagaaaatc aagtatattt taaaagaagg gatgtgggat
361 caaggaggac agccttggca gcagtggccc ttgaaccagc aacaatggat gcagtcattc
421 cagcaccaac aggatccaag ccagattgat tgggctgcat tggcccaagc ttggattgcc
481 caaagagaag cttcaggaca gcaaagcatg gtagaacaac caccaggaat gatgccaaat
541 ggacaagata tgtctacaat ggaatctggt ccaaacaatc atgggaattt ccaaggggat
601 tcaaacttca acagaatgtg gcaaccagaa tggggaatgc atcagcaacc cccacacccc
661 cctccagatc agccatggat gccaccaaca ccaggcccaa tggacattgt tcctccttct
721 gaagacagca acagtcagga cagtggggaa tttgcccctg acaacaggca tatatttaac
781 cagaacaatc acaactttgg tggaccaccc gataattttg cagtggggcc agtgaaccag
841 tttgactatc agcatggggc tgcttttggt ccaccgcaag gtggatttca tcctccttat
901 tggcaaccag gacctccagg acctccagca cctccccaga atcgaagaga aaggccatca
961 tcattcaggg atcgtcagcg ttcacctatt gcacttcctg tgaagcagga gcctccacaa
1021 attgacgcag taaaacgcag gactcttccc gcttggattc gcgaaggtct tgaaaaaatg
1081 gaacgtgaaa agcagaagaa attggagaaa gaaagaatgg aacaacaacg ttcacaattg
1141 tccaaaaaaa aaaaaaaaa
//