LOCUS BC042813 1164 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens FUN14 domain containing 1, mRNA (cDNA clone MGC:51029
IMAGE:5274638), complete cds.
ACCESSION BC042813
VERSION BC042813.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1164)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1164)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 91 Row: e Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31341096.
FEATURES Location/Qualifiers
source 1..1164
/db_xref="H-InvDB:HIT000052741"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:51029 IMAGE:5274638"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1164
/gene="FUNDC1"
/gene_synonym="MGC51029"
/db_xref="GeneID:139341"
/db_xref="HGNC:HGNC:28746"
CDS 139..606
/gene="FUNDC1"
/gene_synonym="MGC51029"
/codon_start=1
/product="FUN14 domain containing 1"
/protein_id="AAH42813.1"
/db_xref="GeneID:139341"
/db_xref="HGNC:HGNC:28746"
/translation="MATRNPPPQDYESDDDSYEVLDLTEYARRHQWWNRVFGHSSGPM
VEKYSVATQIVMGGVTGWCAGFLFQKVGKLAATAVGGGFLLLQIASHSGYVQIDWKRV
EKDVNKAKRQIKKRANKAAPEINNLIEEATEFIKQNIVISSGFVGGFLLGLAS"
BASE COUNT 384 a 193 c 267 g 320 t
ORIGIN
1 gacaggacta cgcgcctgga gtaggagaag gaggaaaaaa gagaccatag acttccatcc
61 tggcctagag cggcccttaa agtgccaggg agaggagggc gggtggggac cactccagaa
121 ttggccgctg gcggtatcat ggcgacccgg aacccccctc cccaagacta tgaaagtgat
181 gacgactctt atgaagtgtt ggatttaact gagtatgcaa gaagacacca gtggtggaat
241 cgagtgtttg gccacagttc gggacctatg gtagaaaaat actcagtagc tacacagatt
301 gtaatgggtg gcgttactgg ctggtgtgca ggatttctgt tccagaaagt tggaaaactt
361 gcagcaactg cagtaggtgg tggctttctt cttcttcaga ttgctagtca tagtggctat
421 gtgcagattg actggaagag agttgaaaaa gatgtaaata aagcaaaaag acagattaag
481 aaacgagcga acaaagcagc acctgaaatc aacaatttaa ttgaagaagc aacagaattt
541 atcaagcaga acattgtgat atccagtgga tttgtgggag gctttttgct cggacttgca
601 tcttaaggac atgaatattc tcccataacg gattcaacta tgagaagaga agtggcagca
661 ataaggcagt ctctcaaaag tcatactgcc agagtctcta gggcaaggag aaacaactag
721 ctggacaata ctcaattcac aacttagcat tttgccatct gaagcttggc aaactagtat
781 ctgctgtaaa acaacctata tggtatgtga accgtagtat tcctgagcaa aacgtggctt
841 tcatcgcttt gtaaaaattt gcatctgttt agaaactagc ctataaaata tcaccattgg
901 atgtagatat ggagagaaaa gaaatatgtt gggtttattg cttagcgaaa tattctcttt
961 ttatttaaat aaaatgttct tcattgtgtt ttatggtatg tgtccataat ttaaaattca
1021 tgttatagtt tcagtattaa agctgacttt ttttttttta agatatgttt gcaataagtt
1081 aaaaaactgt aatacccttt tgtggaaagc tttagaaatg atataattat taaagatatt
1141 aaacaggcaa aaaaaaaaaa aaaa
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