LOCUS BC042674 1790 bp mRNA linear HUM 06-OCT-2005
DEFINITION Homo sapiens phospholipase B1, mRNA (cDNA clone IMAGE:5191712),
complete cds.
ACCESSION BC042674
VERSION BC042674.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1790)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1790)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 50 Row: k Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 58801564
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1790
/db_xref="H-InvDB:HIT000052737"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5191712"
/tissue_type="Brain, adult, 6 pooled whole brains"
/clone_lib="NIH_MGC_114"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1790
/gene="PLB1"
/gene_synonym="PLB"
/db_xref="GeneID:151056"
/db_xref="HGNC:HGNC:30041"
/db_xref="IMGT/GENE-DB:30041"
/db_xref="MIM:30041"
CDS 196..1467
/gene="PLB1"
/gene_synonym="PLB"
/codon_start=1
/product="PLB1 protein"
/protein_id="AAH42674.1"
/db_xref="GeneID:151056"
/db_xref="HGNC:HGNC:30041"
/db_xref="IMGT/GENE-DB:30041"
/db_xref="MIM:30041"
/translation="MPITCPTQNEPFLRTPRNSNYTYPIKPAIENWGSDFLCTEWKAS
NSVPTSVHQLRPADIKVVAALGDSLTTAVGARPNNSSDLPTSWRGLSWSIGGDGNLET
HTTLPNILKKFNPYLLGFSTSTWEGTAGLNVAAEGARARDMPAQAWDLLERMKNSPDI
NLEKDWKLVTLFIGVNDLCHYCENPEAHLATEYVQHIQQALDILSEELPRAFVNVVEV
MELASLYQGQGGKCAMLAAQNNCTCLRHSQSSLEKQELKKVNWNLQHGISSFSYWHQY
TQREDFAVVVQPFFQNTLTPLNERGDTDLTFFSEDCFHFSDRGHAEMAIALWNNMLEP
VGRKTTSNNFTHSRAKLKCPSPESPYLYTLRNSRLLPDQAEEAPEVLYWAVPVAAGVG
LVVGIIGTVVWRCRRGGRREDPPMSLRTVAL"
BASE COUNT 519 a 508 c 437 g 326 t
ORIGIN
1 ctttgttgac catctccgca atgccttgga cgtcctgcat agagaggtgc ccagagtcct
61 ggtcaacctc gtggacttcc tgaaccccac tatcatgcgg caggtgttcc tgggaaaccc
121 agacaagtgc ccagtgcagc aggccagctt gaaccacttg gaagcaaaac agagaccctg
181 gacctgagag cagagatgcc catcacctgt cccactcaga atgagccctt cctgagaacc
241 cctcggaata gtaactacac gtaccccatc aagccagcca ttgagaactg gggcagtgac
301 ttcctgtgta cagagtggaa ggcttccaat agtgttccaa cctctgtcca ccagctccga
361 ccagcagaca tcaaagtggt ggccgccctg ggtgactctc tgactacagc agtgggagct
421 cgaccaaaca actccagtga cctacccaca tcttggaggg gactctcttg gagcattgga
481 ggggatggga acttggagac tcacaccaca ctgcccaaca ttctgaagaa gttcaaccct
541 tacctccttg gcttctctac cagcacctgg gaggggacag caggactaaa tgtggcagcg
601 gaaggggcca gagctaggga catgccagcc caggcctggg acctgttaga gcgaatgaaa
661 aacagccccg acatcaacct ggagaaagac tggaagctgg tcacactctt cattggggtc
721 aacgacttgt gtcattactg tgagaatccg gaggcccact tggccacgga atatgttcag
781 cacatccaac aggccctgga catcctctct gaggagctcc caagggcttt cgtcaacgtg
841 gtggaggtca tggagctggc tagcctgtac cagggccaag gcgggaaatg tgccatgctg
901 gcagctcaga acaactgcac ttgcctcaga cactcgcaaa gctccctgga gaagcaagaa
961 ctgaagaaag tgaactggaa cctccagcat ggcatctcca gtttctccta ctggcaccaa
1021 tacacacagc gtgaggactt tgcggttgtg gtgcagcctt tcttccaaaa cacactcacc
1081 ccactgaacg agagagggga cactgacctc accttcttct ccgaggactg ttttcacttc
1141 tcagaccgcg ggcatgccga gatggccatc gcactctgga acaacatgct ggaaccagtg
1201 ggccgcaaga ctacctccaa caacttcacc cacagccgag ccaaactcaa gtgcccctct
1261 cctgagagcc cttacctcta caccctgcgg aacagccgat tgctcccaga ccaggctgaa
1321 gaagcccccg aggtgctcta ctgggctgtc ccagtggcag cgggagtcgg ccttgtggtg
1381 ggcatcatcg ggacagtggt ctggaggtgc aggagaggtg gccggaggga agatcctcca
1441 atgagcctgc gcactgtggc cctctaggcc cgggggtggg tcctcaccct aaactcccta
1501 tagccactct cttcaccgcc ctctgcccca gccactcccg gccaccagga catgcttcaa
1561 tgcctggtgc cataggaagc ccaggggaca gtcacaactt cttggggcct gggcttcttc
1621 caggcctatg ctcctggaat ggatacattt aaataaagtc caaagctatt ttaaaaaaaa
1681 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1741 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//