LOCUS BC042651 3492 bp mRNA linear HUM 09-JUN-2008 DEFINITION Homo sapiens Ras association (RalGDS/AF-6) domain family member 5, mRNA (cDNA clone MGC:17344 IMAGE:4342962), complete cds. ACCESSION BC042651 VERSION BC042651.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3492) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3492) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (02-JAN-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Lou Staudt cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 26 Row: l Column: 20 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 32996734. FEATURES Location/Qualifiers source 1..3492 /db_xref="H-InvDB:HIT000052734" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:17344 IMAGE:4342962" /tissue_type="Lymph, lymphoma" /clone_lib="NIH_MGC_85" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..3492 /gene="RASSF5" /gene_synonym="Maxp1" /gene_synonym="NORE1" /gene_synonym="NORE1A" /gene_synonym="NORE1B" /gene_synonym="RAPL" /gene_synonym="RASSF3" /db_xref="GeneID:83593" /db_xref="HGNC:HGNC:17609" /db_xref="MIM:607020" CDS 391..1188 /gene="RASSF5" /gene_synonym="Maxp1" /gene_synonym="NORE1" /gene_synonym="NORE1A" /gene_synonym="NORE1B" /gene_synonym="RAPL" /gene_synonym="RASSF3" /codon_start=1 /product="Ras association (RalGDS/AF-6) domain family member 5" /protein_id="AAH42651.1" /db_xref="GeneID:83593" /db_xref="HGNC:HGNC:17609" /db_xref="MIM:607020" /translation="MTVDSSMSSGYCSLDEELEDCFFTAKTTFFRNAQSKHLSKNVCK PVEETQRPPTLQEIKQKIDSYNTREKNCLGMKLSEDGTYTGFIKVHLKLRRPVTVPAG IRPQSIYDAIKEVNLAATTDKRTSFYLPLDAIKQLHISSTTTVSEVIQGLLKKFMVVD NPQKFALFKRIHKDGQVLFQKLSIADRPLYLRLLAGPDTEVLSFVLKENETGEVEWDA FSIPELQNFLTILEKEEQDKIQQVQKKYDKFRQKLEEALRESQGKPG" BASE COUNT 877 a 914 c 897 g 804 t ORIGIN 1 gcaggaaagg cgcgggaggc gggggaggtg cggagatggc gctctgcacg gcggcggagg 61 gagggcgctg gcgccgggga cacgaaaccg cagagcccgg acgagtcagg gagtgaggcg 121 cgagccgggc gcccggggct ctgcaggcgc aggcggcgcg gggacaggag caggttaccg 181 ggccgcccga gcgctcgcac cccgctgaaa gaaacgcagg cggcccgccg gctctgcctg 241 gtccgctacc cgaccagctc ccggctcggg gctcagagct aggggcttac gccaagcgga 301 gcccggggag gggtgcccac ctccctccgc cgcatcccaa gcccggcccc cttgatgcgc 361 tggcggcctc ggccgggaac tccggggtag atgaccgtgg acagcagcat gagcagtggg 421 tactgcagcc tggacgagga actggaagac tgcttcttca ctgctaagac tacctttttc 481 agaaatgcgc agagcaaaca tctttcaaag aatgtctgta aacctgtgga ggagacacag 541 cgcccgccca cactgcagga gatcaagcag aagatcgaca gctacaacac gcgagagaag 601 aactgcctgg gcatgaaact gagtgaagac ggcacctaca cgggtttcat caaagtgcat 661 ctgaaactcc ggcggcctgt gacggtgcct gctgggatcc ggccccagtc catctatgat 721 gccatcaagg aggtgaacct ggcggctacc acggacaagc ggacatcctt ctacctgccc 781 ctagatgcca tcaagcagct gcacatcagc agcaccacca ccgtcagtga ggtcatccag 841 gggctgctca agaagttcat ggttgtggac aatccccaga agtttgcact ttttaagcgg 901 atacacaagg acggacaagt gctcttccag aaactctcca ttgctgaccg ccccctctac 961 ctgcgcctgc ttgctgggcc tgacacggag gtcctcagct ttgtgctaaa ggagaatgaa 1021 actggagagg tagagtggga tgccttctcc atccctgaac ttcagaactt cctaacaatc 1081 ctggaaaaag aggagcagga caaaatccaa caagtgcaaa agaagtatga caagtttagg 1141 cagaaactgg aggaggcctt aagagaatcc cagggcaaac ctgggtaacc ggtcctgctt 1201 cctctcctcc tggtgcattc agatttattt gtattattaa ttattatttt gcaacagaca 1261 ctttttctca ggacatctct ggcaggtgca tttgtgcctg cccagcagtt ccagctgtgg 1321 caaaagtctc ttccatggac aagtgtttgc acgagggttc agctgtgccc gcccccaggc 1381 tgtgccccac cacagattct gccaaggatc agaactcatg tgaaacaaac agctgacgtc 1441 ctctctcgat ctgcaagcct ttcaccaacc aaatagttgc ctctctcgtc accaaactgg 1501 aacctcacac cagccggcaa aggaaggaag aaaggtttta gagctgtgtg ttctttctct 1561 ggcattgatt cctctttgag ttctcttact tgccacgtac aggaccatta tttatgagtg 1621 aaaagctgta gcacattcct tttgcaggtc tgagctaagc ccctgaaagc agggtaatgc 1681 tcataaaagg actgttcccg cggccccaag gtgcctgttg ttcacactta agggaagttt 1741 ataaagctac tggccccaga tgctcagggt aaggagcacc aaagctgagg ctggctcaga 1801 gatctccaga gaagctgcag cctgccctgg ccctggctct ggccctggcc cacattgcac 1861 atggaaaccc aaaggcatat atctgcgtat gtgtggtact tagtcacatc tttgtcaaca 1921 aactgttcgt ttttaagtta caaatttgaa tttaatgttg tcatcatcgt catgtgtttc 1981 cccaaaggga agccagtcat tgaccattta aaaagtctcc tgctaagtat ggaaatcaga 2041 cagtaagaga aagccaaaaa gcaatgcaga gaaaggtgtc caagctgtct tcagccttcc 2101 ccagctaaag agcagaggag ggcctgggct acttgggttc cccatcggcc tccagcactg 2161 cctccctcct cccactgcga ctctgggatc tccaggtgct gcccaaggag ttgccttgat 2221 tacagagagg ggagcctcca attcggccaa cttggagtcc tttctgtttt gaagcatggg 2281 ccagacccgg cactgcgctc ggagagccgg tgggcctggc ctccccgtcg acctcagtgc 2341 ctttttgttt tcagagagaa ataggagtag ggcgagtttg cctgaagctc tgctgctggc 2401 ttctcctgcc aggaagtgaa caatggcggc ggtgtgggag acaaggccag gagagcccgc 2461 gttcagtatg ggttgagggt cacagacctc cctcccatct gggtgcctga gttttgactc 2521 caatcagtga taccagacca cattgacagg gaggatcaaa ttcctgactt acatttgcac 2581 tggcttcttg tttaggctga atcctaaaat aaattagtca aaaaattcca acaagtagcc 2641 aggactgcag agacactcca gtgcagaggg agaaggactt gtaattttca aagcagggct 2701 ggttttccaa cccagcctct gagaaaccat ttctttgcta tcctctgcct tcccaagtcc 2761 ctcttgggtc ggttcaagcc caagcttgtt cgtgtagctt cagaagttcc ctctctgacc 2821 caggctgagt ccatactgcc cctgatccca gaaggaatgc tgacccctcg tcgtatgaac 2881 tgtgcatagt ctccagagct tcaaaggcaa cacaagctcg caactctaag atttttttaa 2941 accacaaaaa ccctggttag ccatctcatg ctcagcctta tcacttccct ccctttagaa 3001 actctctccc tgctgtatat taaagggagc aggtggagag tcattttcct tcgtcctgca 3061 tgtctctaac attaatagaa ggcatggctc ctgctgcaac cgctgtgaat gctgctgaga 3121 acctccctct atggggatgg ctattttatt tttgagaagg aaaaaaaaag tcatgtatat 3181 atacacataa aggcatatag ctatatataa agagataagg gtgtttatga aatgagaaaa 3241 ttattggaca attcagactt tactaaagca cagttagacc caaggcctat gctgaggtct 3301 aaacctctga aaaaagtata gtatcgagta cccgttccct cccagaggtg ggagtaactg 3361 ctggtagtgc cttctttggt tgtgttgctc agtgtgtaag tgtttgtttc caggatattt 3421 tctttttaaa tgtctttctt atatgggttt taaaaaaaag taataaaagc ctgttgcaaa 3481 aaaaaaaaaa aa //