LOCUS BC042608 2576 bp mRNA linear HUM 06-OCT-2005
DEFINITION Homo sapiens family with sequence similarity 90, member A1, mRNA
(cDNA clone MGC:34304 IMAGE:5167203), complete cds.
ACCESSION BC042608
VERSION BC042608.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2576)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2576)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 52 Row: o Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 55743109.
FEATURES Location/Qualifiers
source 1..2576
/db_xref="H-InvDB:HIT000052724"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:34304 IMAGE:5167203"
/tissue_type="Brain, adult medulla"
/clone_lib="NIH_MGC_119"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2576
/gene="FAM90A1"
/gene_synonym="FLJ10408"
/db_xref="GeneID:55138"
/db_xref="HGNC:HGNC:25526"
/db_xref="IMGT/GENE-DB:25526"
/db_xref="MIM:25526"
CDS 539..1933
/gene="FAM90A1"
/gene_synonym="FLJ10408"
/codon_start=1
/product="FAM90A1 protein"
/protein_id="AAH42608.1"
/db_xref="GeneID:55138"
/db_xref="HGNC:HGNC:25526"
/db_xref="IMGT/GENE-DB:25526"
/db_xref="MIM:25526"
/translation="MMARRDPKPGAKRLVRAQTLQKQRRAPVGPRAPPPDEEDPRLKC
KNCEAFGHTARSTRCPMKCWKAALVPPNFGEKEGKENLKPWKPQVEANPGPLNKDKGE
KEERPRPQDPQRKALLHIFSGKPPEKPLPNQKGSTESSDYLRVASGPMPVHTTSKRPR
VDPVLSDRSATEMSDRGSVLASLSPLRKASLSSSSSLGPKERQTGAAADIPQTAVRHQ
GPEPLLVVKPTHSSPEGGCREVPQAASKTHGLLQAARPQAQDKRPAVTSQPCPPAATH
SLGLGSNLSFGPGAKRSAPAPIQACLNFPKKPRLGPFQIPESAIQGGELGAPENLQPL
PAATELGPRTSPQIGTRTPAQVLSGDRQPPHSRPCLPTAQACTMSHHPAASHDGAQPL
RVLFRRLENGRWSSSLLTAPSFHSPEKPGAFLAQSPHVSEKSEGPCVRVPPSVLYEDL
QVPSSSEDSDSDLE"
BASE COUNT 675 a 746 c 713 g 442 t
ORIGIN
1 cgggcccttc cagaagcaac ccaggagccc cgagacctgc agggatgtgt gcaccctgac
61 ccctgacgca tagccatgca cctgcagcca gctggcctcg ggcttgaaaa catggcgggt
121 gcgctccaat tcacggtggt ttccaagcgc attctggagg agaaaacaca tgagtgtgtg
181 gtcagggttc tctgccgaca gacctaccgt ggggaagaaa gagaagttct gaagatggat
241 catggccgtg actgcatgac aaggagaatc tccatgatga cacggaggcc tacgtcgaga
301 tagagtaaat atggtccaat taaaaggtga ccagaggcag tataaaaggc agcctggaaa
361 gcagaggtcc ctctccgccc cttcctccgt cttcctggat gctgcatcgc ttccagcggg
421 gctgctccag cacctgccca tctcagcgcc agccggggaa agaaagtaga cgtgtaattt
481 caggtgaccc gacaatcaac ccctgaaaaa ggcggtcata aagccccagg agacgaagat
541 gatggcacgt cgtgacccca aacctggggc aaagagactg gtgagagccc agaccctcca
601 gaagcagcgg agggccccag ttgggccaag ggctcccccg cccgatgaag aagatcccag
661 gctcaagtgc aaaaactgtg aggcctttgg ccacacggcc agaagtacca ggtgccccat
721 gaagtgctgg aaggcagccc tggttccacc gaactttggg gaaaaggaag ggaaggaaaa
781 cctgaaacca tggaagcccc aggttgaagc gaaccctggg cccttgaaca aggataaggg
841 agagaaggaa gagagaccaa ggccacaaga cccgcagagg aaggctctcc tccacatatt
901 ttccgggaaa cctccagaga agccgctgcc aaatcaaaaa ggatccacgg aatcttctga
961 ttatctgagg gttgcaagcg ggccaatgcc ggtccacaca accagtaaga ggccgcgtgt
1021 ggaccctgtc ctctctgatc gctcagctac cgaaatgtct gacaggggct ccgtcttagc
1081 ttcactgtct cccctcagaa aagccagtct gagctcctcc tcaagtcttg gaccaaagga
1141 aagacagaca ggggctgcgg ccgacatccc tcagactgca gtcaggcacc agggccccga
1201 gcctctcctc gtggtgaagc cgacacacag cagccctgag ggtggctgtc gagaagttcc
1261 ccaggctgcc tccaaaaccc acggcctgct ccaggccgcc agaccccagg cacaagacaa
1321 acgtcctgcg gtgacctcac agccctgccc accagccgcc acacacagct tgggcctagg
1381 ctccaatctc agcttcgggc caggagccaa gagatctgcc ccggctccga ttcaggcttg
1441 cctgaacttc cccaagaaac cgagactggg tcccttccag atccccgaaa gcgccatcca
1501 gggaggtgag ctgggggccc cggagaatct ccaacctctg ccagccgcaa ccgaacttgg
1561 accacgtacg tcaccccaga taggcacgag gacacccgcc caggtgctta gcggcgaccg
1621 gcagcctccg cacagcagac cttgcctgcc tactgcccag gcctgcacca tgtcccatca
1681 cccagcggcc agccatgatg gggcccagcc tctcagagtg ctctttcgga gactggaaaa
1741 cggacgctgg agctccagcc tgctgacggc cccctcattt cactctcctg agaagccggg
1801 agccttcctc gctcagagcc ctcatgtctc agagaagtct gagggtccct gtgttcgtgt
1861 cccaccaagc gtcctctatg aggaccttca ggttccctcc tcctcagagg acagcgattc
1921 tgacctggag tgagactgca ggtggcaggg gctccttggc ctccagctcc cgtgacttgg
1981 aggggactgt gggactgagg agcacagagc agagagcaga ctctgtgcgg tgactccgaa
2041 gctccccggc tgtggccctt ctgtggatgt gggagcccag gccaggcagg gagcagatgc
2101 agggactctg ccccgttgaa ttctggtgag ggacattgta gttcgcatgg ttctctggaa
2161 acgcgccagg aaaagcttcc gtgccagtga ttcgttgcct cagaaactgc atgacgcgca
2221 ggagtcagac ttccgctggg acgtcaatag gaaacggggg aattactgtg tatttgctct
2281 ctagacgact gaataaggga aaagttaggg aaccctgaga ggtgcagccc ttccgctgtg
2341 ccccgccctg agagcagtgt ttccgacgct gggaagcgcg ctgtgcaaag cgctctcggg
2401 gtctttcctc agcctcgaaa agtgggctct ggaatccctt tgtaaatagg tgtgttgaat
2461 ttgttttgaa gtgaataaaa ttctcaaaaa gaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2521 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaa
//