LOCUS BC042606 3784 bp mRNA linear HTC 27-OCT-2008 DEFINITION Homo sapiens pleckstrin homology domain containing, family G (with RhoGef domain) member 5, mRNA (cDNA clone IMAGE:4750645), with apparent retained intron. ACCESSION BC042606 VERSION BC042606.1 KEYWORDS HTC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3784) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3784) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (02-JAN-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: James Cleaver, M.D. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 29 Row: k Column: 10 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 38373681 This clone has the following problem: retained intron. FEATURES Location/Qualifiers source 1..3784 /db_xref="H-InvDB:HIT000052722" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:4750645" /tissue_type="Skin, squamous cell carcinoma" /clone_lib="NCI_CGAP_Skn4" /lab_host="DH10B" /note="Vector: pCMV-SPORT6.1" BASE COUNT 762 a 1216 c 1177 g 629 t ORIGIN 1 ggacgctgac ctcttttgaa gggaggactg aggagatcac cccacccctc ctccggttgg 61 gaggccagtg gggcccaggg gagcctgggt gccccgctga ctgatgccct ctgctcctcc 121 cctgcagacg accagagccc cgctgaaaag aagggactgc gctgtcagaa ccccgcctgc 181 atggacaagg ggcgggcggc caaggtatgt caccacgccg actgccagca gctgcaccgc 241 cgggggcccc tcaacctctg cgaggcctgt gacagcaagt tccacagcac catgcattat 301 gatgggcatg tccgcttcga ccttccccca caaggctctg tgctggcccg gaacgtgtcc 361 acccggtcat gcccgccgcg caccagcccc gcagtggact tggaggagga ggaggaggag 421 agctctgtgg atggcaaagg ggaccggaag agcacaggcc tgaaactctc caagaagaaa 481 gcaaggagga gacacacgga tgacccaagc aaggaatgct tcactctgaa atttgacctg 541 aatgtggaca ttgagacaga gatcgtccca gccatgaaga agaagtcact gggggaggtg 601 ctgctgcctg tatttgaaag gaagggcatt gcgctgggca aagtggacat ctacctggac 661 cagtccaaca cacccctgtc cctcaccttc gaggcctaca ggttcggggg acactacctt 721 cgtgtcaaag ccccagccaa gcctggagat gagggcaagg tggagcaggg catgaaggac 781 tccaagtccc tgagtttgcc gattctgcgg ccagctggga ccgggccccc cgccctggag 841 cgtgtggacg cccagagccg ccgggagagc ctggacatct tggcccctgg ccgccgccgc 901 aagaacatgt cggagttcct gggggaggcg agcatccccg ggcaggagcc ccccacgccc 961 tccagctgct ctctgcccag cggcagcagt ggcagcacca acactggcga cagctggaag 1021 aaccgggcgg ccagtcgctt cagcggcttt ttcagctccg gccccagcac cagcgccttt 1081 ggccgggagg tagacaagat ggagcagctg gagggcaagc tgcacaccta cagcctcttc 1141 gggctgccca ggctgccccg ggggctgcgc ttcgaccatg actcctggga ggaggagtac 1201 gatgaagacg aggatgagga caatgcctgc ctgaggctgg aggacagctg gcgggagctc 1261 attgatgggc atgagaagct gacccggcgg cagtgccacc agcaggaggc ggtgtgggag 1321 ctgctgcaca cggaggcctc ctacatcagg aaactgcggg tgatcatcaa cctgttcctg 1381 tgctgcctcc tgaacctgca agagtcaggg ctgctgtgtg aggtggaggc ggagcgcctg 1441 ttcagcaaca tcccggagat cgcgcagctg caccgcaggc tgtgggctag cgtgatggcg 1501 ccggtgctgg agaaggcgcg gcgcacgcga gcgctgctac agcccgggga cttcctcaaa 1561 ggcttcaaga tgttcggctc gctcttcaag ccctacatcc gctactgcat ggaggaggag 1621 ggctgcatgg agtacatgcg cggcctgctg cgcgacaacg acctcttccg ggcctacatc 1681 acgtgggcgg agaagcaccc acagtgccag aggctgaagc tgagcgacat gctggccaaa 1741 ccccaccagc ggctcaccaa gtacccgctg ctgctcaagt cggtgctgag gaagaccgag 1801 gagccgcgcg ccaaggaggc cgtcgtcgcc atgatcggct ccgtggagcg cttcatccac 1861 cacgtgaacg cgtgcatgcg gcagcggcag gagcggcagc ggctggcggc cgtggtgagc 1921 cgcatcgacg cctacgaggt ggtggaaagc agcagcgacg aagtggacaa gctcctgaag 1981 gaatttctgc acctggactt gacagcgccc atccctggcg cctccccgga ggagacgcgg 2041 cagctgctgc tggaggggag cctgaggatg aaggagggga aggacagcaa gatggatgtg 2101 tactgcttcc tcttcacgga tctgctgttg gtgaccaaag cagtgaagaa ggcagagagg 2161 accagggtca tcaggccacc cctgctcgtg gacaagattg tgtgccggga gctacgggac 2221 cctgggtcct tcctccttat ctacctgaat gagtttcaca gtgctgtagg ggcctacacg 2281 ttccaggcca gtggccaggc cttgtgccgt ggctgggtgg acaccattta caatgcccag 2341 aaccagctgc aacagctgcg tgcacaggag cccccaggca gtcagcagcc cctgcagagc 2401 ctggaagagg aggaggatga gcaggaggag gaagaggagg aggaggagga ggaggaggaa 2461 ggcgaggaca gtggcacttc agctgccagc tcccctacca tcatgcggaa aagcagcggc 2521 agccccgact ctcagcactg tgcctcagat ggctccacgg agaccctggc catggttgtg 2581 gtagagcctg gggacacgct gtcctccccc gagttcgaca gcggtccttt cagctcccag 2641 tctgatgaga cctctctcag caccactgcc tcatctgcca cgcccaccag tgagctgctg 2701 cccctgggtc cggtggacgg ccgctcctgc tccatggact ctgcctacgg caccctctcc 2761 ccaacctcct tacaagactt tgtggcccca ggcccaatgg cagagctagt gcctcgggcc 2821 ccagagtccc cacgagttcc ttcccctcca ccctcgcccc gtctccgccg ccgcacccct 2881 gtccagctgt tgagctgccc gccccacctg ctcaagtcta agtccgaggc cagcctcctc 2941 cagctgctgg caggggctgg cacccatggg acaccctctg cccccagccg cagcctgtca 3001 gagctctgcc tggctgttcc agccccaggt attaggactc agggctcccc tcaggaagct 3061 gggcccagct gggattgccg aggggcccct agccctggca gcggtcctgg gctagtcggc 3121 tgcctggccg gggaacctgc aggctcccac aggaagaggt gtggagacct gccctcgggg 3181 gcctctccca gggtccagcc tgagccccca ccaggggtct ctgcccagca caggaagctg 3241 accctggccc agctctaccg aatcaggacc accctgctgc ttaactccac gctcactgcc 3301 tcggaggtct gagcagaggg aggcccccaa gagtgccatt gaccaagaga cagcagacag 3361 cctgcctcct ggggcgtgcc ggcacctgct tcagctactg cctcctgtat gcatgagccg 3421 gatgctgggc aggatccctg cctacgcccg ggcccgattt gcgctttgcc ggactggatg 3481 gagtggagga ggcccaggcc acagtaccac cccacctgcc caggcagccc ctcgtcacct 3541 actccccgaa gttaccagct cagctcgagt cttcagggct gggctcctag gctgcccatc 3601 ctacttctac cctcactggc ctccagtggg attcactcct gccctgcccc caccttccca 3661 gtcccacagg ccacccctgg cttgggctgg gttctgtgaa gttacgtatt tattgagctt 3721 ttggttcttt tataaagact tgtctagact ccaaaaaaaa aaaaaaaaaa aaaaaaaaaa 3781 aaaa //