LOCUS BC042558 3267 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens zinc finger, DHHC-type containing 21, mRNA (cDNA clone
MGC:42917 IMAGE:4837003), complete cds.
ACCESSION BC042558
VERSION BC042558.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3267)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3267)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 72 Row: k Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31341670.
FEATURES Location/Qualifiers
source 1..3267
/db_xref="H-InvDB:HIT000052714"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:42917 IMAGE:4837003"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3267
/gene="ZDHHC21"
/db_xref="GeneID:340481"
/db_xref="HGNC:HGNC:20750"
CDS 473..1270
/gene="ZDHHC21"
/codon_start=1
/product="zinc finger, DHHC-type containing 21"
/protein_id="AAH42558.1"
/db_xref="GeneID:340481"
/db_xref="HGNC:HGNC:20750"
/translation="MGLRIHFVVDPHGWCCMGLIVFVWLYNIVLIPKIVLFPHYEEGH
IPGILIIIFYGISIFCLVALVRASITDPGRLPENPKIPHGEREFWELCNKCNLMRPKR
SHHCSRCGHCVRRMDHHCPWINNCVGEDNHWLFLQLCFYTELLTCYALMFSFCHYYYF
LPLKKRNLDLFVFRHELAIMRLAAFMGITMLVGITGLFYTQLIGIITDTTSIEKMSNC
CEDISRPRKPWQQTFSEVFGTRWKILWFIPFRQRQPLRVPYHFANHV"
BASE COUNT 1056 a 560 c 631 g 1020 t
ORIGIN
1 ttccgtcgcg gctcccggga gctaagcgag acggcgacgg cggcagtcgt ccctccccac
61 gcgggcgcgc gggcatgcgg acacccactc ggccggtcca ggccctcagg ctcccggaag
121 cggaagggga gagcggcccg gcctgggcgg cggcgccgga ggaggcggag gtggcgcggc
181 aggaggaggg gaaagagctg ctggtggtcg ggagagcggc ggcagcgaga ggcgagccag
241 cggcgacgaa tgaagaactt tttcacttac tgcaggattt tcagcttcag caagcaggtt
301 ctcatggaga actgttattg aagagagatc catttggtgg gatataatta aaaaaaatga
361 atcaaaagaa aatctctaaa tgcagattcc agaaaaatta cagcacatct cagtgaattt
421 gcaagtggat catccttcct tgtgggttag caggcagtta taagattgca aaatgggtct
481 ccggattcac tttgttgttg acccacatgg ttggtgctgc atgggtttga ttgtctttgt
541 ttggttatac aatattgttt taattcccaa aattgtcctc tttcctcact atgaagaagg
601 acatattcca ggcatattaa taataatatt ctatggcatt tccatattct gtctggttgc
661 cttagtgagg gcctccataa ctgatccagg aagactccct gagaacccca agatcccaca
721 tggagaaagg gagttctggg aattatgtaa caagtgtaat ttgatgagac caaagcgttc
781 ccatcactgc agccgctgcg gccactgtgt gaggagaatg gatcatcact gtccatggat
841 taacaattgt gttggtgaag ataatcattg gctctttctg cagttgtgtt tctacactga
901 acttcttact tgctacgcac tgatgttttc tttctgccac tattactatt ttcttccact
961 aaaaaagcgt aatttggacc tctttgtttt tagacatgaa ttggccataa tgagactagc
1021 agcctttatg ggcattacta tgttagttgg aataactgga ctcttttaca ctcaactaat
1081 tggcatcatc acagatacaa catctattga aaagatgtca aactgttgtg aagatatatc
1141 gaggccccga aagccatggc agcagacctt ctcagaagtt tttggcactc gttggaagat
1201 cctgtggttc attcctttca ggcagaggca accactgcga gttccctacc actttgccaa
1261 tcatgtctaa acagatggat ggtgggcaca gatgggtcct ccatgctggc aatgcgttac
1321 aggttttatg ataatagaac tatgacagtc ttcaagtcaa ttaaaatcca cccaccaatc
1381 ttaggcatca taatgtgccc caggctttat tttaatagtg atcttgatcc tgttgtggga
1441 ctaatacaag atctatattt aagttttaaa gcatgtttac tttcaaatta gctttccaca
1501 gggatttctt gaaatgcttt tgttattaaa ctcaaaaggc agtgattagg atgaaataat
1561 tgtacataat ttattttagt actgacagtg ttacagattc taatttatgg taaatttcag
1621 atgtttattt aaaattttca cttttaaaca gtaaccaaat ctaaatttaa ttattcaggt
1681 tttacaaaag ttgatacacc ttcttatagt ataggtaaat tttctttttc aaatccaatt
1741 taaaataacc tttcctttta aatgtgctgc aacgttttta aaaatgcagc agcataggag
1801 tgaacaacag caacacaaaa cgggcattgg tttcttagga gtggcttgct tacgttttct
1861 tcttttttct tcaccaaaac caacatgaaa gtaccactga agtaaaacac caactaccta
1921 ccttactata aaggaaatgt taaaattttt ttcacaataa ttttttcaat tttcactatt
1981 actgttgtaa ttattgattg tgattaaaat atttgctccc aggagaactc ctgaccagtg
2041 ggcatgtatt cctattttat cctaagattt taatgagcaa aaaggggaga gaatttgcaa
2101 taacttcaca attacctttt ctagtgcagt tatattagaa tgcatatgtt tttaaaatgc
2161 tagtataact agatagtata taatgtacag tataaagagg aatattgtgc ttttgaaaag
2221 agtatacttt ttacttttat ttatgtacta gtagatgtaa aatttcgcat tgaaggttta
2281 tatatattgg ccaactcata tagaaatttt atttatagga agctactact aaaaaaagtc
2341 actaactttg tgtacctata atccctaaat taaaattaaa ttttaattgg ctggctgtaa
2401 tttgcattga gagacctttt actagtagct agtgttagga agtgaaccta aaataagaaa
2461 atataatgat ctgtgtttat cattagcctt gtacaaatgt aaattactaa tagtgatgtt
2521 cttttgcaag gcatagaaca tttgtatgaa aagacattta gtatgctttg aaaaaaactc
2581 agcttttagt ttttttccat tagaatactg caaaacccat atatcttttt aaaaaattta
2641 tgtactcaca gtctttccct tgaagagaag attgaaaaag tctactgttc ataaaccatg
2701 ctaacatttt ccttttagct agttttgaaa gtaaggaaca atacctggga aataataaaa
2761 cagaaggtta ccattgtcag ccagttggct atactgtggt tagttctttc agaaattgta
2821 aatatcttgt agcatattct gaaataatag agtaagttct tctcagagat gttaatatca
2881 tgtttttcat gttctaatta gaatacttta ttacttacaa actcagaaat acgaacagaa
2941 atacagcaga cgaacatatt tattggtact gaaaagagat gtagtaaatt aaatagaaga
3001 aatatattta taaagcttag tgaaacacaa aattagaatg ttcatgtcag gcacaagggt
3061 ttggattttg tgcaagctaa tttggccaca tttggcctgg tgacagaact gttcataagg
3121 aagtaatata tagataaggt aggtagatat cagttgaatg ccttatattg tatacattcc
3181 tttcaaataa agaccttgag aaaacaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
3241 aaaaaaaaaa acaaaaaaaa aaaaaaa
//