LOCUS BC042553 2498 bp mRNA linear HUM 01-DEC-2003
DEFINITION Homo sapiens cDNA clone IMAGE:5177040, complete cds.
ACCESSION BC042553
VERSION BC042553.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2498)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2498)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (02-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 51 Row: n Column: 15
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..2498
/db_xref="H-InvDB:HIT000052711"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5177040"
/tissue_type="Brain, Lung, Testis, adult, pooled whole"
/clone_lib="NIH_MGC_115"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
CDS 212..730
/codon_start=1
/product="Unknown (protein for IMAGE:5177040)"
/protein_id="AAH42553.1"
/translation="MASPVPSVPLGTPVMLAFLAPRIANLKIQLAKLDSEAWPGVLDS
ERDRLILINEKEELLKEMRFISPRKWTQGEVEQLEMARKRLEKDLQAARDTQSKALTE
RWGWGPRVCRTLLSLAVCPQPPDGGRMRGLRAPGLHPEHAQFRDLSGCRHRKSGKMVC
HPVRQLPWNFAW"
BASE COUNT 624 a 584 c 617 g 673 t
ORIGIN
1 gatgaatcca catctctatt gtaccaggaa cagggcaagg acattgcctt gttcatgtct
61 gcaccccatt cctgcagagc ctacttcatt gttggcacat ggtaggcacc cacatgtgtt
121 tgtttagaaa aaaaataggt tccttgagat gacaagctga tcaaaggaag acagtaactg
181 tcaaagattg ctctgagatg tctgtttctt catggcatct cctgttccct cagtgccatt
241 aggcacacca gtcatgcttg ctttcttggc ccccaggatc gccaacctga agatccagct
301 ggccaagctt gacagtgagg cctggcctgg ggtgctggac tcagagaggg accggctgat
361 ccttatcaac gagaaggagg agctgctgaa ggagatgcgc ttcatcagcc cccgcaagtg
421 gacccagggg gaggtggagc agctggagat ggcccggaag cggctggaaa aggacctgca
481 ggcagcccgg gacacccaga gcaaggcgct gacggagagg tggggctggg gccccagggt
541 gtgtaggacc cttctctcac tggcagtctg tcctcagccc ccagatgggg gaagaatgag
601 ggggctccgg gcccctgggc tccaccctga gcacgctcag ttcagagatc tctcaggttg
661 ccgacatagg aaatcaggaa agatggtttg ccatccagtg cgccagctac cctggaattt
721 tgcatggtga atcatgctac caaaaagtct gcttaggtgc aggtgttcaa aaatgtatct
781 tctgactcaa ttaagccaca taactctata taacttaaag cagtcatttt ccaacttttt
841 gacagtgatg cacattttat actgtaacct gatccaaggt tcacaaaata gtgcatgctc
901 tttctacctc tgatggtcct ctgatgtttt ctcccttctg ttgcattttg tttcatgcag
961 tttgtgactc accaaattga tttcacccca tgctaagtaa ggggttgcag tttgcagttt
1021 gaaaaacact ggtctggata ggggttgcaa actggcatgc ttataggagc caagcaggtc
1081 acagaaatgc tagagaccca cctggcagtg gtctgtgtta gaccagagtg cacagacccc
1141 actggtctaa agcaggtgct gtctctctgc tccagcaaat gggagtgcag gcctcgggct
1201 gccagagctg cctgtacttc aaacaaaaga gtcgttcaga ttttttattt ttaaatattg
1261 ggaactaatc cagaagtttt tttaaaaaaa tatgcaaatc agcctcatct atgggcctga
1321 tataacctaa aagccaccgg tttacattct ttaatttaga ccttattata gacattgtct
1381 ttgtttattt ccttcagtgt tcccaccaac ctcctcaccc acattgcacc gaatgcaaca
1441 ctgcgttcac cataggcttt acaaagctct ccagcttcat gttcatttat tcattctgtt
1501 catcagccaa tgtttactca ttcatttgag aaaccttttg ctgcacagat tgtgtgtgca
1561 aggcaatttg gggcactcag aaattaacaa gacatggtcc ctgccccatg acctttaaat
1621 ctattctagt tattttcacc attttttggc aggagccttt attcagcaag gtccctgccc
1681 gtaaggagct tagaagtgaa gctagagatt ttcaagtgtg tgtgtgtggg gggggggggg
1741 ggcgtgtgtg tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg tggcatatgt ggtgtgtgtg
1801 tgtttggaat atgagcaagg gaattccttt ttctagtgaa atcagaggca gaggcccagt
1861 ctatgaagca agtaaacgtg cctactgcct cagtggaagc agtcgggagt cctagagatg
1921 ctgtctgtgc tcactctgtc accccatcat ggggcttcca gagagccttt gagctctaag
1981 gcacccagct tgcagtacca ttctagcaac tgagtaggcc ccacttgcac atggcatggt
2041 gccaggtgga tcgggttccc caagttcttg cctggcctcc catggcttca gagaccccct
2101 tgactcatcg atggtaggaa tctctccgca ctagttgctt agtcagaact gctaacagtg
2161 atgtccaaag cgtatccatt tcctctcttc cgttcttcat tggcagcagc agctgattag
2221 ccctgatcca ccaccagttg gtgggagaag gagaaggaca gagcttgaat aattggtgtt
2281 ctgcagccct tggaagcacc ttgctagaag tcttctttag caccacgact ccattctgct
2341 ttctctggga ttttacgctt tggggataag gcctgtgtct atatgcccgc atgcctttag
2401 tgttcgttga aagaataaat ggttagctgg cctaggtaga cccttactgg gcaaaaaaaa
2461 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaa
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