LOCUS BC042550 2454 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens seven in absentia homolog 1 (Drosophila), mRNA (cDNA
clone MGC:34550 IMAGE:5198176), complete cds.
ACCESSION BC042550
VERSION BC042550.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2454)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2454)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 50 Row: p Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 55749556.
FEATURES Location/Qualifiers
source 1..2454
/db_xref="H-InvDB:HIT000052710"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:34550 IMAGE:5198176"
/tissue_type="Brain, adult, 6 pooled whole brains"
/clone_lib="NIH_MGC_114"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2454
/gene="SIAH1"
/gene_synonym="hSIAH1"
/gene_synonym="HUMSIAH"
/gene_synonym="Siah-1"
/gene_synonym="Siah-1a"
/db_xref="GeneID:6477"
/db_xref="HGNC:HGNC:10857"
/db_xref="MIM:602212"
CDS 367..1308
/gene="SIAH1"
/gene_synonym="hSIAH1"
/gene_synonym="HUMSIAH"
/gene_synonym="Siah-1"
/gene_synonym="Siah-1a"
/codon_start=1
/product="seven in absentia homolog 1 (Drosophila)"
/protein_id="AAH42550.1"
/db_xref="GeneID:6477"
/db_xref="HGNC:HGNC:10857"
/db_xref="MIM:602212"
/translation="MTGKATPPSLYSWRGVLFTCLPAARTRKRKEMSRQTATALPTGT
SKCPPSQRVPALTGTTASNNDLASLFECPVCFDYVLPPILQCQSGHLVCSNCRPKLTC
CPTCRGPLGSIRNLAMEKVANSVLFPCKYASSGCEITLPHTEKADHEELCEFRPYSCP
CPGASCKWQGSLDAVMPHLMHQHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGF
HFMLVLEKQEKYDGHQQFFAIVQLIGTRKQAENFAYRLELNGHRRRLTWEATPRSIHE
GIATAIMNSDCLVFDTSIAQLFAENGNLGINVTISMC"
BASE COUNT 743 a 456 c 510 g 745 t
ORIGIN
1 ccagcgcgtc gccccctgca tccgtggcct ccactggagc tgggcaggac cctacccagt
61 gaatctggag aaaacaaact tgggagacag acgaaagctt agggcacatt ggaggacagc
121 gcagctgtgg ctcccatttt tggagatgca gtcgaatttg agctcacagg gaggtgtggt
181 tgcctcctgg ggatggaaag gcttcctttc tccacctctg taactggtgc ttctgagaag
241 taaatggtat ttggatcctg acctcagacg tgaatttggg tcttctgtgc ttaggagcag
301 aaagagccca ggaggggcct gttcctttac ttcttggggg aaacgcaatg cgtggcctga
361 cttctcatga cgggaaaggc tactccacct tctctgtact cctggagggg agtcttgttc
421 acatgtttac cagcggccag gacaaggaag agaaaagaaa tgagccgtca gactgctaca
481 gcattaccta ccggtacctc gaagtgtcca ccatcccaga gggtgcctgc cctgactggc
541 acaactgcat ccaacaatga cttggcgagt ctttttgagt gtccagtctg ctttgactat
601 gtgttaccgc ccattcttca atgtcagagt ggccatcttg tttgtagcaa ctgtcgccca
661 aagctcacat gttgtccaac ttgccggggc cctttgggat ccattcgcaa cttggctatg
721 gagaaagtgg ctaattcagt acttttcccc tgtaaatatg cgtcttctgg atgtgaaata
781 actctgccac acacagaaaa agcagaccat gaagagctct gtgagtttag gccttattcc
841 tgtccgtgcc ctggtgcttc ctgtaaatgg caaggctctc tggatgctgt aatgccccat
901 ctgatgcatc agcataagtc cattacaacc ctacagggag aggatatagt ttttcttgct
961 acagacatta atcttcctgg tgctgttgac tgggtgatga tgcagtcctg ttttggcttt
1021 cacttcatgt tagtcttaga gaaacaggaa aaatacgatg gtcaccagca gttcttcgca
1081 atcgtacagc tgataggaac acgcaagcaa gctgaaaatt ttgcttaccg acttgagcta
1141 aatggtcata ggcgacgatt gacttgggaa gcgactcctc gatctattca tgaaggaatt
1201 gcaacagcca ttatgaatag cgactgtcta gtctttgaca ccagcattgc acagcttttt
1261 gcagaaaatg gcaatttagg catcaatgta actatttcca tgtgttgaaa tggcaatcaa
1321 acattttctg gccagtgttt aaaacttcag tttcacagaa aataaggcac ccatctgtct
1381 gccaacctaa aactctttcg gtaggtggaa gctagacaca tgaaggtaaa taaaaagaaa
1441 ggctgttaaa tacaggaaac agttgcatgt agtaacacta atatatttaa aaataagtca
1501 acagtaaacc actgaaaaaa tatatgtata tacacccaag atgggcatct tttgtattaa
1561 gaaaggaagc attgtaaaat aattctgagt tttgtgtttg ttgtagattg attgtattgt
1621 tgaaaaagtt tgtttttgcg tgggagtgtg tgcctgcgtg ggtgtgtgcg tgtttgggtt
1681 tttttccttt aactgacaag ccatcttgag tggtcatggg ccactgcttt tccctttgtg
1741 agtcaataca tagtgctgct gtgtgctttt tttgtgtgta tttgctaatt tttattaatt
1801 ttagtttttc attaaataaa tttgactttt ctgtaattca ggtttttcct ttttttgtac
1861 cattttaaag ttagtatctt ttgatatgca tatttgttta tggtaaaaaa tttataacgt
1921 gttcaatatt ttcttttccc ccattaatca gttcattaga aatattttaa aatcagctat
1981 tttgtgaagc catgagttcc agaaagtaaa ggtgacatcg gaaaaataat caaaagctat
2041 ttaaagcatc tataaggtgc tctctttctg tcttctacag atgagtcaca cctttgagct
2101 taatctttga aaggttagag aataaattga tttttataaa tactgcaaat caggcttttg
2161 tttccttttt cagatatctt ggacaaatca catattttaa aatttgttct tgtatttatt
2221 ggttttgcag aagaaggcat cgtcatgcac agtatttgta attaaaagca aatcatttgt
2281 ttaaaaaggc agtttgcaaa aaatgttttt ggtcttttat aattctcatt aaaagaatat
2341 ctgtcaaatt aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2401 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaa
//