LOCUS BC042525 1983 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens BTB (POZ) domain containing 6, mRNA (cDNA clone
MGC:42553 IMAGE:4824525), complete cds.
ACCESSION BC042525
VERSION BC042525.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1983)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1983)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 71 Row: k Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 30794221.
FEATURES Location/Qualifiers
source 1..1983
/db_xref="H-InvDB:HIT000052704"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:42553 IMAGE:4824525"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1983
/gene="BTBD6"
/gene_synonym="BDPL"
/db_xref="GeneID:90135"
/db_xref="HGNC:HGNC:19897"
CDS 304..1536
/gene="BTBD6"
/gene_synonym="BDPL"
/codon_start=1
/product="BTB (POZ) domain containing 6"
/protein_id="AAH42525.1"
/db_xref="GeneID:90135"
/db_xref="HGNC:HGNC:19897"
/translation="MFNNELMADVHFVVGPPGATRTVPAHKYVLAVGSSVFYAMFYGD
LAEVKSEIHIPDVEPAAFLILLKYMYSDEIDLEADTVLATLYAAKKYIVPALAKACVN
FLETSLEAKNACVLLSQSRLFEEPELTQRCWEVIDAQAEMALRSEGFCEIDRQTLEII
VTREALNTKEAVVFEAVLNWAEAECKRQGLPITPRNKGHVLGRALYLVRIPTMTLEEF
ANGAAQSDILTLEETHSIFLWYTATNKPRLDFPLTKRKGLAPQRCHRFQSSAYRSNQW
RYRGRCDSIQFAVDRRVFIAGLGLYGSSSGKAEYSVKIELKRLGVVLAQNLTKFMSDG
SSNTFPVWFEHPVQVEQDTFYTASAVLDGSELSYFGQEGMTEVQCGKVAFQFQCSSDS
TNGTGVQGGQIPELIFYA"
BASE COUNT 431 a 582 c 584 g 386 t
ORIGIN
1 agcgggtggc agccccgcgg gtcacagcgc cgccgccgcc catgctgctg cccctagcct
61 gcctgcacgg ccgcgtcgct cagtgcctga cctccttgct tttgcttgca gagccgctcc
121 cgaggccccg gcgcggcgcg agggcgcggg gcgcggcgtc cacaggcgcc gaggctgccc
181 ccgccgcccc gcccgcgaag atggcggcgg aactctacgc tcccgcccac actcggcaac
241 aaccaccagg agagccccgg ctggcggtgc tgccgcccca cgctgcgcga gaggaacgcg
301 ctcatgttca acaatgagct catggccgac gtgcacttcg tcgtggggcc cccgggggcg
361 accaggacgg tgcccgccca caagtacgtc ttggctgtcg gcagctccgt cttctatgcc
421 atgttctacg gagacctggc ggaagtcaaa tctgaaattc acattccaga cgtggagccc
481 gcagcctttc tgatcctctt aaagtacatg tacagtgatg agatcgatct ggaagccgac
541 acggtgctgg ccactctgta tgctgctaag aagtacatcg tcccagcatt ggcaaaagcc
601 tgtgtcaact ttctggagac aagtttggaa gccaagaacg cctgcgtcct gctgtcccag
661 agccggctgt ttgaggagcc cgagctgacg cagcgctgct gggaggtcat tgacgcacag
721 gccgagatgg ccctacggtc cgaaggcttc tgtgagatag accggcagac gctggagatc
781 attgtcactc gggaggccct caacaccaaa gaggcggtgg tcttcgaggc cgtcctgaac
841 tgggccgagg cggagtgcaa gaggcagggg ctgccaatca ccccacgaaa caaggggcat
901 gttctggggc gagccctcta tctggtccga attccaacca tgaccctaga ggagtttgcc
961 aacggcgctg cccagtcaga catcctgact ctggaggaga cccacagcat cttcctgtgg
1021 tacacggcca ccaacaagcc ccgcctggac tttcccctga ccaagaggaa gggcctcgcc
1081 ccgcagaggt gccaccgatt ccagtcttct gcctaccgca gcaaccagtg gcggtaccgc
1141 gggcgctgcg acagcatcca gtttgcagtg gacagaaggg tatttattgc agggctgggc
1201 ctgtatggct ccagctctgg gaaggctgag tacagcgtga agattgagct caagcggctc
1261 ggggtggttc tggctcagaa cttgaccaag ttcatgtcag acggatccag taacaccttc
1321 ccggtctggt ttgaacaccc ggtccaggtt gaacaagaca ccttctacac ggccagtgcc
1381 gtcctggacg gcagcgaact cagctacttt gggcaggagg ggatgacgga agtgcagtgt
1441 ggaaaggtgg ccttccagtt ccagtgctcc tcggacagca ccaacgggac tggggtccag
1501 ggtgggcaga tccctgagct cattttctat gcctgaggtg cccggggagg ctgcagcagg
1561 tcagcgagtg agtggagggg aagtcaaggt gctaactgct tcttgacacc atgaaaggct
1621 gctcttaact ttgtctctct ttgacatgta gtcagctgaa gcttgactgt gtagagacat
1681 tttccacaca gccagaaccc agggattgga gtcttaggca tctctggtac agtggggtgc
1741 acgtctcagg tggaggaaga tttacggctc aagacaggcc ccagatcccc tcccagtggc
1801 acccacgcca cctgctttga ggggttggat cttcctgcta ccctcttgga ttctaagtgg
1861 ttccaagctt aacttgagac cttcccttca aatctaaaat tggcaaaaag tcacttaaaa
1921 tagtggactt ctgtaataaa ggttgcctaa aataacaaaa aaaaaagaaa aaaaaaaaaa
1981 aaa
//