LOCUS BC042500 2583 bp mRNA linear HUM 17-JUL-2006 DEFINITION Homo sapiens zinc finger protein 678, mRNA (cDNA clone MGC:42493 IMAGE:4823179), complete cds. ACCESSION BC042500 VERSION BC042500.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2583) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2583) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (02-JAN-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 71 Row: h Column: 14. FEATURES Location/Qualifiers source 1..2583 /db_xref="H-InvDB:HIT000052702" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:42493 IMAGE:4823179" /tissue_type="Testis" /clone_lib="NIH_MGC_97" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..2583 /gene="ZNF678" /gene_synonym="MGC42493" /db_xref="GeneID:339500" /db_xref="HGNC:HGNC:28652" CDS 346..1923 /gene="ZNF678" /gene_synonym="MGC42493" /codon_start=1 /product="zinc finger protein 678" /protein_id="AAH42500.1" /db_xref="GeneID:339500" /db_xref="HGNC:HGNC:28652" /translation="MGTISLCIGVCAFEGANTSTSFYKLVYTAILSYSIQDLLPEQDM KDLCQKVTLTRHRSWGLDNLHLVKDWRTVNEGKGQKEYCNRLTQCSSTKSKIFQCIEC GRNFSWRSILTEHKRIHTGEKPYKCEECGKVFNRCSNLTKHERIHTGEKPYKCDECGK VFNWWSQLTNHKKIHTGEKPYKCDECDKVFNWWSQLTSHKKIHSGEKPYPCEECGKAF TQFSNLTQHKRIHTGEKPYKCKECCKAFNKFSNLTQHKRIHTGEKPYKCEECGNVFNE CSHLTRHRRIHTGEKPYKCEECGKAFTQFASLTRHKRIHTGEKPYQCEECGKTFNRCS HLSSHKRIHTGEKPYKCEECGRTFTQFSNLTQHKRIHTGEKPYKCKECGKAFNKFSSL TQHRRIHTGVKPYKCEECGKVFKQCSHLTSHKRIHTGEKPYKCKECGKAFYQSSILSK HKRIHTEEKPYKCEECGKAFNQFSSLTRHKRIHTGEKRYKCKECGKGFYQSSIHSKYK RIYTGEEPDKCKKCGSL" BASE COUNT 965 a 445 c 486 g 687 t ORIGIN 1 gatctggcgg ggcctttgtc ttgtgctcca gctggagctt tggtcccgta ttctcggcta 61 tttatcccca gctgcgggag gccctggtga ctctgctgct gcagtgtctg gtttccctgt 121 gacctgcagg tactgggagt tacatagcta agatgccagg acaccccgaa agccggaaaa 181 cgggactact ggcattcagt gatgtggtca tagaattctc tccagaggag tgggcatgcc 241 tggaccctgc ccagcgaaat ttgtataggg atgtgatgtt cgagaactac agaaacctgg 301 tctccctggg acttccagga ctatgttaaa atagaagcat tgataatggg cacaatatca 361 ctttgcattg gtgtctgtgc atttgaagga gcaaacacct ctaccagttt ttataaactg 421 gtttatacag ctattttatc ttattccatt caagaccttt tgccagagca ggatatgaaa 481 gatttatgcc aaaaagtgac actgacaaga catagaagct ggggccttga caatttgcac 541 ttagtgaaag actggagaac tgtgaatgaa ggtaaggggc agaaagaata ttgcaataga 601 cttactcaat gttcatcaac taaaagcaaa atctttcaat gtattgaatg tggcagaaat 661 tttagctgga ggtcaatcct tactgaacat aagagaattc atactggaga gaagccatac 721 aaatgtgaag aatgtggcaa agttttcaat agatgttcaa acctaacaaa acatgaaaga 781 attcatactg gagagaaacc ctacaaatgt gacgaatgtg gcaaagtttt taattggtgg 841 tcacaactaa ctaaccataa gaaaattcat actggagaga aaccctacaa atgtgatgaa 901 tgtgacaaag tttttaattg gtggtcacaa ctaactagcc ataagaaaat tcatagtgga 961 gagaaaccat acccatgtga agaatgtggc aaagccttta cccagttctc aaaccttaca 1021 caacataaga gaattcatac tggagagaaa ccctacaaat gcaaagaatg ttgcaaagcc 1081 tttaacaagt tctcaaacct tactcaacat aagagaattc atactggaga gaaaccttac 1141 aagtgtgaag aatgtggcaa cgtttttaat gagtgctcac acctaactag acataggaga 1201 attcatactg gagagaaacc ctacaaatgt gaagaatgtg gcaaagcctt tacacagttt 1261 gcaagcctta ctcgtcataa aagaattcat actggagaaa aaccctacca atgtgaagaa 1321 tgtggcaaaa cttttaatcg gtgttcacac ctaagtagcc ataagagaat tcatactgga 1381 gagaaaccct acaaatgtga agaatgtggc agaaccttta ctcaattctc aaacctcact 1441 cagcataaaa gaattcatac tggagagaaa ccctacaaat gcaaagaatg tggcaaagcg 1501 tttaacaagt tctcaagcct tactcaacat aggagaattc atactggagt gaaaccctac 1561 aaatgtgaag aatgtgggaa agtttttaaa cagtgctctc acctaactag ccataagaga 1621 attcatactg gagagaaacc ctacaaatgt aaagaatgtg gcaaagcttt ttaccaatcc 1681 tcaatcctta gtaagcataa gagaattcat actgaagaga aaccctacaa atgtgaagaa 1741 tgtggcaaag cctttaacca gttctcaagc cttactcgtc ataaaagaat tcatactgga 1801 gagaaacgct acaaatgtaa agaatgtgga aaaggttttt accaatcctc aatccatagt 1861 aagtataaga gaatttatac tggagaggaa cctgacaaat gtaaaaaatg tggcagtctt 1921 taaaaactgc ttcattatac atggcttcac taatttcata ctgaataaaa gtggtatgag 1981 cataatgact gtttaaggat gtttcacaaa atgtaagctt cagagtgcac aacactatac 2041 tgaatgaaat ttataaatat aaaagattac aatatcttta tttcaaagat cttcctgtaa 2101 acagaatctg tactagagga aaaaccctta aacaattatt cagactttat tcaactttag 2161 aggattttac gggggcaaaa aacctcctac aaatgtggaa aaacattttt tcaagatata 2221 tgccttagaa aacaccagag tttatagtat agtagaatat attttacaga tacagtgaat 2281 acaaacaaat gtccaaaatt aagtctaaat aaaacattac ataatttact gtagaaagta 2341 ctaaggcact aacagtttca gatgttactt taaagcagtg ttgattgtcg agaataattc 2401 aaagttaaaa tagataattt agttgtatgt aaatttaaat gaatcaagag atgatgtctt 2461 tttgaagcac agttacattc atgttatact tttttgcatt aaaagttttt atatttttgg 2521 ttttaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 2581 aaa //