LOCUS BC042478 4658 bp mRNA linear HUM 18-AUG-2006 DEFINITION Homo sapiens apolipoprotein L domain containing 1, mRNA (cDNA clone IMAGE:3874052), partial cds. ACCESSION BC042478 VERSION BC042478.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 4658) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 4658) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (02-JAN-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 13 Row: n Column: 7. FEATURES Location/Qualifiers source 1..4658 /db_xref="H-InvDB:HIT000097250" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:3874052" /tissue_type="Eye, retinoblastoma" /clone_lib="NIH_MGC_67" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene <1..4658 /gene="APOLD1" /gene_synonym="DKFZP434F0318" /gene_synonym="FLJ25138" /db_xref="GeneID:81575" /db_xref="HGNC:HGNC:25268" CDS <1..910 /gene="APOLD1" /gene_synonym="DKFZP434F0318" /gene_synonym="FLJ25138" /codon_start=2 /product="APOLD1 protein" /protein_id="AAH42478.1" /db_xref="GeneID:81575" /db_xref="HGNC:HGNC:25268" /translation="GGARGGQRSAASRGQRCNPTRSRMFRAPCHRLRARGTRKARAGA WRGCTFPCLGKGMERPAAREPHGPDALRRFQGLLLDRRGRLHGQVLRLREVARRLERL RRRSLVANVAGSSLSATGALAAIVGLSLSPVTLGTSLLVSAVGLGVATAGGAVTITSD LSLIFCNSRELRRVQEIAATCQDQMREILSCLEFFCRWQGCGDRQLLQCGRNASIALY NSVYFIVFFGSRGFLIPRRAEGDTKVSQAVLKAKIQKLAESLESCTGALDELSEQLES RVQLCTKSSRGHDLKISADQRAGLFF" BASE COUNT 1185 a 1025 c 1132 g 1316 t ORIGIN 1 cgggggtgcg cggggcggtc agcgatctgc agcttcgcgg ggacagagat gtaacccaac 61 tcgttcacgg atgttccgcg cgccgtgtca ccggctgcgg gccaggggta ctcggaaggc 121 gcgggcagga gcctggcgag gatgcacctt cccctgcctt ggaaagggaa tggagaggcc 181 ggcggcccgg gagccgcatg ggcccgacgc gctgcggcgc ttccagggac tgctgctgga 241 ccgccgaggc cggctgcacg gccaggtgct gcgcctgcgc gaggtggccc ggcgcctgga 301 gcgcctgcgc aggcgctccc tcgtagccaa cgtggccggc agctcgctga gcgcaacggg 361 cgccctcgcc gccatcgtgg ggctctcgct cagcccggtc accctgggga cctcgctgct 421 ggtgtcggcc gtggggctgg gggtggccac agccggaggg gccgtcacca tcacgtccga 481 tctctcgctg atcttctgca actcccggga gctgcggagg gtgcaggaga tcgcggccac 541 ctgccaggac cagatgcgag agatcctgag ctgcctcgag tttttctgcc gctggcaggg 601 ctgcggggac cgccagctgc tgcagtgcgg gaggaacgcc tccatcgccc tgtacaattc 661 tgtctacttc atcgtcttct ttggctcacg tggcttcctc atccccaggc gggcggaggg 721 ggacaccaag gttagccagg ccgtgctgaa ggccaagatt cagaaactgg ccgagagcct 781 ggagtcctgc accggggctc tggacgaact cagcgagcag ctggagtctc gggttcagct 841 ctgcaccaag tccagtcgtg gccacgacct caagatctct gctgaccagc gtgcagggct 901 gtttttctga gaacatcctt tccccctaat gaccgaggcc agcaaatcat cctcatggga 961 tgctccagaa tttgtagctc ccttaggaaa acaccaagct gggttaggag ccgaaggcaa 1021 aggatgagaa aaactgtttt tgaagtgggc aggtccccaa agcccttctt ttcccatcac 1081 tgtgacatct gcctgggctt gagtgctacg gacttttcag tcttcctagt ggaaaaatgt 1141 gacccaaaaa ctctttttcc tttatcaaaa actttctgtc taaacacagc tgggcaggca 1201 ctcctgtttt aaagttattt cggggtccct gaccctgccc tggtggcttg gcctgagact 1261 ggagagagtg ccatcctctg ggtcctctcc aagtcctact agtctttgaa gtcctcaaaa 1321 tgtgcgtgag gaaggcattt gcctctattc cagaatttct gatacaaaga actccagaat 1381 ccagagcaaa tcagcccttc tctgaacgtt gtaggatggt tcagaaccca gagaggaccc 1441 tggtgctgat atctcctcct cttccctttc ccctcagctt acttactccc agatgcggcc 1501 tgggtatgaa gtaggccttt cctgagtggc tcccaatcca gtcctccaag tactcagagg 1561 ggaagcccgt gaagccgtca tctaagtcct gctccctcac atgaagctga gggccagata 1621 gatggagcga ctgccaactt catttcccga catcattgtg ttcagaagag agtgatgggt 1681 tttgagttag acagtcctgg gcttgagaca ggctttgtca ctactgtgtg agtgtagcca 1741 cctaatctct ctgagactgt gtaaaacaaa gatgataaaa tctcaccctg ttgtgagata 1801 ttaaatgagc caaagtgcct agcatgatgg tgctggctca tatagtgtag tccctggaat 1861 ggcaaattaa catcacccag gaacttgtta gaaaggcaaa ttcttggaca caaccctcct 1921 gatttatgga atcagaaact ctggctgtgg ggcccagcaa cctgagttta aacaatttct 1981 ctgggtggtt ctgcggcaca ctaaggtttg aaaatcacta caacaaatgc taacttctaa 2041 tccccttgat gagctttcac gaagtctcac ggcttctcta gggactccat ggtcttcaga 2101 gtcgttcaca gatgaccaag gacagactgt gtcccagaag ccaaaatgag agagagagag 2161 agagcacgcg tacgtgcacc ctggggcagt gtctcaccgt atgaataagg gatgtaacac 2221 taaaagccca ttagggggca gtgtttcccg cctgttgtag aaactggtac agaaaggaat 2281 atgaagttcc tgaaactgac ctttgtctat tattaccttc tctgaaaagt gccagtccat 2341 gtatttttta tttattttaa gtttgtaatt taatttttaa ttattgttta gtgtttgcat 2401 ttaattttat ttaatcacca catttagaaa ataataagag caagtttcta aatgggagac 2461 tgctgaggct ctttgcaaga gatgagatta agtttgagtt tctaaggcag ggcatgagct 2521 ggaaatagca ttgctttcct tgattgtctc tctccttcag ggagattctt tttctctagt 2581 gttttaagtg atcctttgaa gtaagtgtgg agagtcttga atggcaagac caggagctga 2641 gtttaagctt gtaatggaag cttgcattgt gggatatata actgaggaag catatttatc 2701 ctgaaggtat tttgccagaa ggtatcactt gacctggaaa aggaatctat ttagttcagg 2761 aaagataaaa agtttagagg tatgtgaagg aagcacttag aacttgcaag cctgatgtcc 2821 tatcaagtta tgtcttctgg gtgacagaca aaatagcttg tcttatggtg gtgatgtgtt 2881 gcattttcac tttggggtct gtaagaaact gtcagtgaaa atatgtacaa ttccttcaat 2941 ttccattctt aacaactgta atgttgaaaa ataagttgaa aagtctttgg gaccatacat 3001 gcaaaaacgg tgcctctgtt acttaattat ttaatattct ataaatgtac ccaatctgtc 3061 cgcacccttc ccagtgatgg ggcagtatgt ctgaggaagt ataatttcag tactggggtc 3121 ggggagagga ggtgatgttt ctacattttt attttttcta taaattgcaa ttggtctgta 3181 tgctggttta ttttgaaatt tatattggtt tcttttcaag ctggtgtcat ctcctagact 3241 gtttcaccca gatgctagca tttttttttt ttttttgaga cagagtctca ctctgtcacc 3301 taggctggag ttgcagtggt ttgatctcgg ctcactgcaa cctccgactc ctgggttcaa 3361 gcaattctgc ctcagcctcc tgagtagctg ggattacaga tgtgcaccag cacacccggc 3421 taattttttg tatttttagt agagacaggg tttcgccatg ttggccaggc tggtcttgaa 3481 ctcctggcct tatgtgatcc gcccaccttg gcttcccaaa gtgctgggat tacaggcatg 3541 agccacctcg cctggccaga tgctagcatt ttagatcaaa caattcattt tagatgaatt 3601 gttttgtttc acaatcattt taaatcattt tagaatgtac ttcacattat tagttgtgtt 3661 atggcataaa ggtacaacca ttccctaact ccatctttta ttaatgctta agtttaaatt 3721 atattcttcc aatgcctaag ctattcccta gaattaaact gggcactttt ggaagcagca 3781 acagtaacag cagcagcaaa cttttcctct catattttgg gtgtatcaaa agttctagac 3841 ttttgaagtt atgatttcag tggcccactt tatttctaag gaagagtgtc tactttggaa 3901 cgatactttg cacatagtag gaactcaaga aatacatttg aataattata attaactgtt 3961 tagctatctt aatgagaatt tgttgacaac aaaagatcat ccatcgcctt atgtgtgagt 4021 aagattggag cctctatcaa gatttagtca agttcagtta gattgattct agaaacaaat 4081 atttatttct ttcttttacg gggatgtgaa taaggctttt ccttaaggcc ttcattcttt 4141 aaacaaacag gttgaaatgg tatgttgtaa aagagaagac gggagagagg tatttagatg 4201 ataagtgtac ttcacaaaaa tgccaaagtt tgaaaaatag gtatgtttgt tctaaatgtt 4261 taagtgcttc tctgttaggt tctggggctt gcaatcattt gaattgttct gtttcacaat 4321 aaaggagatt cactgggttc tgcattttca ggattcaata gaactgctcc attaaaaaaa 4381 taatccttag caagcattcg aatcctaact gctttgatgc acttgccctc gggcacctgt 4441 catttccaat atggtaggtg tcaaagtcaa aagtatttac tgggagaaaa aagagaggag 4501 tggttgtaga agtctcccta aatcagacat gtcaagcaat cagccaacgt ggtgtatttc 4561 tcattcaata ttttagtgtg aattgagaca ctgagataaa gacatcgtgc agagataaat 4621 ggggatacag ttaaaaaaaa aaaaaaaaaa aaaaaaaa //