LOCUS BC042426 1734 bp mRNA linear HUM 06-OCT-2003 DEFINITION Homo sapiens LIM domain only 2 (rhombotin-like 1), mRNA (cDNA clone MGC:34396 IMAGE:5188482), complete cds. ACCESSION BC042426 VERSION BC042426.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1734) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1734) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (02-JAN-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Life Technologies, Inc. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 50 Row: h Column: 7 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 6633806. FEATURES Location/Qualifiers source 1..1734 /db_xref="H-InvDB:HIT000052690" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:34396 IMAGE:5188482" /tissue_type="Colon, Kidney, Stomach, adult, whole pooled" /clone_lib="NIH_MGC_116" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1734 /gene="LMO2" /gene_synonym="RBTN2" /gene_synonym="RBTNL1" /gene_synonym="RHOM2" /gene_synonym="TTG2" /db_xref="GeneID:4005" /db_xref="MIM:180385" CDS 431..907 /gene="LMO2" /gene_synonym="RBTN2" /gene_synonym="RBTNL1" /gene_synonym="RHOM2" /gene_synonym="TTG2" /codon_start=1 /product="LMO2 protein" /protein_id="AAH42426.1" /db_xref="GeneID:4005" /db_xref="MIM:180385" /translation="MSSAIERKSLDPSEEPVDEVLQIPPSLLTCGGCQQNIGDRYFLK AIDQYWHEDCLSCDLCGCRLGEVGRRLYYKLGRKLCRRDYLRLFGQDGLCASCDKRIR AYEMTMRVKDKVYHLECFKCAACQKHFCVGDRYLLINSDIVCEQDIYEWTKINGMI" misc_feature 518..697 /gene="LMO2" /gene_synonym="RBTN2" /gene_synonym="RBTNL1" /gene_synonym="RHOM2" /gene_synonym="TTG2" /note="LIM; Region: LIM domain. This family represents two copies of the LIM structural domain" /db_xref="CDD:pfam00412" misc_feature 710..889 /gene="LMO2" /gene_synonym="RBTN2" /gene_synonym="RBTNL1" /gene_synonym="RHOM2" /gene_synonym="TTG2" /note="LIM; Region: LIM domain. This family represents two copies of the LIM structural domain" /db_xref="CDD:pfam00412" BASE COUNT 433 a 440 c 504 g 357 t ORIGIN 1 ggctcggggc ggccgggcgg gcgcacacca tccccgcggg cggcgcggag ccggcgacag 61 cgcgcgagag ggaccgggcg gtggcggcgg cgggaccggg atggaaggtt aagtcctgag 121 cagcagcagc agctgcagcc gcctggagcc aggctgcgcg ccccggcccc cgcctcggcc 181 gcggcgcgcc cgcagcccgg tgattcgctc tctctctttg gcgtttgaag ggagcgcggt 241 gactgtcctt gagcgcggag gggcgagctc gccggcggag cgccggagca agcggaggcg 301 caggagcggc ggcgacggcg gcggcggcgg cggcgcccga gcacccgagg gggtccgagc 361 cccggcagcc ggccagcccc gcgccacaaa gggagcgccc ccgccgcccg gcaccccgcc 421 tccctcccca atgtcctcgg ccatcgaaag gaagagcctg gacccttcag aggaaccagt 481 ggatgaggtg ctgcagatcc ccccatccct gctgacatgc ggcggctgcc agcagaacat 541 cggggaccgc tacttcctga aggccatcga ccagtactgg cacgaggact gcctgagctg 601 cgacctctgt ggctgccggc tgggtgaggt ggggcggcgc ctctactaca aactgggccg 661 gaagctctgc cggagagact atctcaggct ttttgggcaa gacggtctct gcgcatcctg 721 tgacaagcgg attcgtgcct atgagatgac aatgcgggtg aaagacaaag tgtatcacct 781 ggaatgtttc aaatgcgccg cctgtcagaa gcatttctgt gtaggtgaca gatacctcct 841 catcaactct gacatagtgt gcgaacagga catctacgag tggactaaga tcaatgggat 901 gatataggcc cgagtccccg ggcatctttg gggaggtgtt cactgaagac gccgtctcca 961 tggcatcttc gtcttcactc ttaggcactt tgggggtttg agggtggggt aagggatttc 1021 ttaggggatg gtagaccttt attgggtatc aagacatagc atccaagtgg cataattcag 1081 gggctgacac ttcaaggtga cagaaggacc agcccttgag ggagaactta tggccacagc 1141 ccatccatag taactgacat gattagcaga agaaaggaac atttaggggc aagcaggcgc 1201 tgtgctatca tgatggaatt tcatatctac agatagagag ttgttgtgta cagacttgtt 1261 gtgactttga cgcttgcgaa ctagagatgt gcaattgatt tcttttcttc ctggcttttt 1321 aactcccctg tttcaatcac tgtcctccac acaagggaag gacagaaagg agagtggcca 1381 ttcttttttt cttggccccc ttcccaaggc cttaagcttt ggacccaagg aaaactgcat 1441 ggagacgcat ttcggttgag aatggaaacc acaactttta accaaacaat tatttaaagc 1501 aatgctgatg aatcactgtt tttagacacc ttcattttga ggggaggagt tccacagatt 1561 gtttctatac aaatataaat cttaaaaagt tgttcaacta ttttattatc ctagattata 1621 tcaaagtatt tgtcgtgtgt agaaaaaaaa aacagctctg caggcttaat aaaaatgaca 1681 gactgaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaa //