LOCUS BC042416 1936 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens neuropeptide Y receptor Y5, mRNA (cDNA clone MGC:34438
IMAGE:5191617), complete cds.
ACCESSION BC042416
VERSION BC042416.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1936)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1936)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 50 Row: k Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31377784.
FEATURES Location/Qualifiers
source 1..1936
/db_xref="H-InvDB:HIT000052687"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:34438 IMAGE:5191617"
/tissue_type="Brain, adult, 6 pooled whole brains"
/clone_lib="NIH_MGC_114"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1936
/gene="NPY5R"
/gene_synonym="NPYR5"
/db_xref="GeneID:4889"
/db_xref="HGNC:HGNC:7958"
/db_xref="MIM:602001"
CDS 183..1520
/gene="NPY5R"
/gene_synonym="NPYR5"
/codon_start=1
/product="neuropeptide Y receptor Y5"
/protein_id="AAH42416.1"
/db_xref="GeneID:4889"
/db_xref="HGNC:HGNC:7958"
/db_xref="MIM:602001"
/translation="MDLELDEYYNKTLATENNTAATRNSDFPVWDDYKSSVDDLQYFL
IGLYTFVSLLGFMGNLLILMALMKKRNQKTTVNFLIGNLAFSDILVVLFCSPFTLTSV
LLDQWMFGKVMCHIMPFLQCVSVLVSTLILISIAIVRYHMIKHPISNNLTANHGYFLI
ATVWTLGFAICSPLPVFHSLVELQETFGSALLSSRYLCVESWPSDSYRIAFTISLLLV
QYILPLVCLTVSHTSVCRSISCGLSNKENRLEENEMINLTLHPSKKSGPQVKLSGSHK
WSYSFIKKHRRRYSKKTACVLPAPERPSQENHSRILPENFGSVRSQLSSSSKFIPGVP
TCFEIKPEENSDVHELRVKRSVTRIKKRSRSVFYRLTILILVFAVSWMPLHLFHVVTD
FNDNLISNRHFKLVYCICHLLGMMSCCLNPILYGFLNNGIKADLVSLIHCLHM"
BASE COUNT 640 a 332 c 360 g 604 t
ORIGIN
1 agcgatcgcg ctgggccgcg ctcccgggag cccagggcct gcagcggccg gggcgccccg
61 aggtctgctc attgtgtttt tcaggaaaaa ggaagggaaa gggtgttaca aggaaaggct
121 atcggtaaca actgacctgc cacaaagtta gaagaaagga ttgattcaag aaagactata
181 atatggattt agagctcgac gagtattata acaagacact tgccacagag aataatactg
241 ctgccactcg gaattctgat ttcccagtct gggatgacta taaaagcagt gtagatgact
301 tacagtattt tctgattggg ctctatacat ttgtaagtct tcttggcttt atggggaatc
361 tacttatttt aatggctctc atgaaaaagc gtaatcagaa gactacggta aacttcctca
421 taggcaatct ggccttttct gatatcttgg ttgtgctgtt ttgctcacct ttcacactga
481 cgtctgtctt gctggatcag tggatgtttg gcaaagtcat gtgccatatt atgccttttc
541 ttcaatgtgt gtcagttttg gtttcaactt taattttaat atcaattgcc attgtcaggt
601 atcatatgat aaaacatccc atatctaata atttaacagc aaaccatggc tactttctga
661 tagctactgt ctggacacta ggttttgcca tctgttctcc ccttccagtg tttcacagtc
721 ttgtggaact tcaagaaaca tttggttcag cattgctgag cagcaggtat ttatgtgttg
781 agtcatggcc atctgattca tacagaattg cctttactat ctctttattg ctagttcagt
841 atattctgcc cttagtttgt cttactgtaa gtcatacaag tgtctgcaga agtataagct
901 gtggattgtc caacaaagaa aacagacttg aagaaaatga gatgatcaac ttaactcttc
961 atccatccaa aaagagtggg cctcaggtga aactctctgg cagccataaa tggagttatt
1021 cattcatcaa aaaacacaga agaagatata gcaagaagac agcatgtgtg ttacctgctc
1081 cagaaagacc ttctcaagag aaccactcca gaatacttcc agaaaacttt ggctctgtaa
1141 gaagtcagct ctcttcatcc agtaagttca taccaggggt ccccacttgc tttgagataa
1201 aacctgaaga aaattcagat gttcatgaat tgagagtaaa acgttctgtt acaagaataa
1261 aaaagagatc tcgaagtgtt ttctacagac tgaccatact gatattagta tttgctgtta
1321 gttggatgcc actacacctt ttccatgtgg taactgattt taatgacaat cttatttcaa
1381 ataggcattt caagttggtg tattgcattt gtcatttgtt gggcatgatg tcctgttgtc
1441 ttaatccaat tctatatggg tttcttaata atgggattaa agctgattta gtgtccctta
1501 tacactgtct tcatatgtaa taattctcac tgtttaccaa ggaaagaaca aatgctgggg
1561 tcatataaaa tatatttatg ataactattt acatataata aatagaaatt ttgttaacat
1621 ggaatttaat ttatgtgaaa gagttctgga ttcaaatgtc agttcataat atatggaaga
1681 taattttatg tgttatagta ggattaattt atttagttgt gcagtcagtg tcaatccaat
1741 ctgtaatttc actttagaag gttgtattac cttccacttc catgttgtct tataaacaaa
1801 tgaattgtat tttttgttga aagtaaaagt tatatctaac caaaaaaaaa aaaaaaaaaa
1861 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1921 aaaaaaaaaa aaaaaa
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