LOCUS BC042390 4781 bp mRNA linear HTC 19-NOV-2003
DEFINITION Homo sapiens vesicle transport through interaction with t-SNAREs
homolog 1B (yeast), mRNA (cDNA clone IMAGE:5111445).
ACCESSION BC042390
VERSION BC042390.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4781)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4781)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (02-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 52 Row: g Column: 8
This clone has the following problem: no 5' EST match.
FEATURES Location/Qualifiers
source 1..4781
/db_xref="H-InvDB:HIT000097214"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5111445"
/tissue_type="Cervix, carcinoma"
/clone_lib="NIH_MGC_12"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 1455 a 988 c 932 g 1406 t
ORIGIN
1 cgaaactacc ggaaggacct tgctaaactc catcgggagg tgagaagcac acctttgaca
61 gccacacctg gaggccgagg agacatgaaa tatggcatat atgctgtaga gaatgagcat
121 atgaatcggc tacagtctca aagggcaatg cttctgcagg gcactgaaag cctgaaccgg
181 gccacccaaa gtattgaacg ttctcatcgg attgccacag agactgacca gattggctca
241 gaaatcatag aagagctggg ggaacaacga gaccagttag aacgtaccaa gagtagactg
301 gtaaacacaa gtgaaaactt gagcaaaagt cggaagattc tccgttcaat gtccagaaaa
361 gtgacaacca acaagctgct gctttccatt atcatcttac tggagctcgc catcctggga
421 ggcctggttt actacaaatt ctttcgcagc cattgaactt ctatagggaa gggtttgtgg
481 accagaactt tgaccttgtg aatgcatgat gttagggatg tggatagaat aagcatattg
541 ctgctgtggg ctgacagttc aaggatgcac tgtatagcca ggctgtggga ggagggagga
601 aagatgaaaa accacttaaa tgtgaaggaa caacagcaac aagaccagta tgatatacca
661 aggtaataaa tgctgtttat gacttcttta aatttacata gtactgtagc atattaatac
721 cctgtgaact gcaaaaaacc aaatacattt acagtagtat tggtcaccaa aatagagggg
781 aaactttaca attgtgagaa tgtgtaaatg ttctcattaa ggcagtattg acccagacaa
841 ccatttagta ttcatctatc ccctcaatgc ctcataattc tggaatgcct gttgtgaaac
901 atgtcagtgc acagtgtctc ctaaattctc acacgtgctt gattttctga ttcatctggt
961 gaactgggag taggaagttg gtcatagaca atatgccctc cttctcttgt ctgaccaaag
1021 cttgaagcaa tcacatctac tgccaggtta gctgtagtct tcgcctcttc ctctgaggtg
1081 gccaactgag gattgacttc aacaagatcc agtgctgata gcaaccctgg aagaacaaag
1141 tgtgacaaaa cctcaggttc ccttgctgct actctcagtg agggtcatcc cactgggaca
1201 gggagaacaa gccaaagtaa aaacaagagt ccattttata gtagaaaata cctattttta
1261 ggaagcccct tgcacctcat cctcttggcc atgaatttaa gttaaaacac tgttgtgcta
1321 tagtagatta aaagaaacct tttaagataa tgaaataaac catccctgtt caactaacat
1381 aacaggcata attgtcaggc gttctggaaa aggaaaaggc ttggtgttgg gtgggggagg
1441 ttttcatcct gcttgttggc aaaatgtatg ccacctccag tatgactagg aaccttccag
1501 atgcctgcct ggaaatgaat caagtatgaa ggcagaggaa atctgccact tgcactagcc
1561 aaactgcatt cccacttttg aactctaatg tgttatctgt atctgttaga gcaccacacc
1621 atatgccctg aaatgtagtt attactgcaa acttcattct cacccctgca ggcctgagct
1681 ctggaggcag gttccacatc taacaacatc tttttgtctc ccagcagact gacccagtgt
1741 cttgtacttg atcaagagaa aattcagcca tatgttaatt attttatctg gacttcagtt
1801 accttctgtt aaggtttgag aacttgtgtc aaagttctcg gtagtgttcc tttggcctgg
1861 agcaagtgga agggaagctt aaaccagaag aacctatcca gacctgctac tatgctcacc
1921 cctctaaatg cctcacttct ctatagaatt taacttttta gttggttatt ctggatgaag
1981 ggtgatctga acaagctagt attcaggaat acaagtatct aagaatattt agggtggcca
2041 taaagtctgg aaacacaggc aaatgtacct aatggtttat tgatattaca ctatagtaca
2101 tgatgtgctg aatgccatca tgtccgttca gcatcttccc ttattagcaa tgcatagttg
2161 agtgtacagt gccaaactgc aaccaacagg tgtattactg tagcatttcc atcatttcct
2221 gcacatggac ctgtgttcct gatttgtctc tgatttccac tgactaaacc tgcaccttta
2281 gcatatccca gaagtggtca tcaaagtttg cactattaga aatatataca tgacttatgt
2341 ttccagacta ttgccaccct ataaattaag caaactgctt tatgtatcta gttgacagca
2401 ttataacagt gcagtggcac aatcatggct cactgcagcc tcaacctccc aagtagttgg
2461 gacacctggc taattatttt ttgtagaaac ggggtcacac tatgttgccc acgctggtct
2521 tgaacccctg gggtcaagta atcctcttgc cttggcctcc cagagtactg ggattatagg
2581 tatgaaccac tgtgcctagc cccatgagtg tcttttggag taaaatattg tagcatagga
2641 acaaagagac aagccatgcc atatataagt gctagaggtt attaacccct gctctaagtg
2701 gtgtttttag gaagcaaagc agagaattga acccccaagt tctctggcca ataacctaag
2761 gaccactggc aacatctaag attgcagatc tgagaattag accagtactg cctgcctttt
2821 tgtactgcct aaggttctgg caggctgtgg cgctaaggag accatttctc aatgtgagtt
2881 tctatcccag ctagtcaagg gttctctata gccctgaacc tttcaatctg gggtctctat
2941 ctatacccta gttccatcag atggttactg aagcagtatg atttggtagt tctttaaatt
3001 ttggaatgaa aggtcatttg aagtagcttt aaaaccagaa gctttctgac agaaatggaa
3061 actgtttgca aacaagtatg agttttggaa aagtagccag tcttgataac gtagaattca
3121 tcttagtact ctttccatca gccattctca tctaactgta tcccccttat tagaaatcct
3181 ttcaggctct agtacaagac ctaccctaca taaaggaccc aagatattgt ccagtttgca
3241 gatttcttca agagatcagc tttagctcca aattcacaac tcccaatgaa ccaatctctt
3301 agagtgcaaa ttacagcctt gcactcttat cttatcttgc cttcttatct taatctgcct
3361 ttagataact caaagaactg catcagtttg acaatttatt cttgtattta attgtttaaa
3421 tatacaattt tttactcatt attaccttag tgtaatttgg taagagccat gtccaagcat
3481 gactctaaag gactatatcc tttttattag catggccata taatttttag ctacaaaagt
3541 ttaagcaaaa acaaactctg caatgatgtg gaatagcaga aaagatcctt tgcaggcaag
3601 agactctagc atatttacct atgtagttaa caggctgcag acctggttgc tacatacctg
3661 tattgtgtat ttcctcagca atatacatgc cttctcgata ggttagtccc ccgacaacag
3721 gagttcctgt ggctggagcc agtgtagggt caaatgcatc aatatcaaaa ctcaaatgga
3781 ttggtctttg tctcctaaaa aggaagagga taaaataata cttaaaataa tacttaactg
3841 gttgtccttg gacactcatc cttcttatgg ttgcaactcc ttgattttgt tgctattagt
3901 cctagtactt tgttaataaa gctgttaata catttccagg cttcctattc ttggaagtta
3961 ctgagattgg caatattaac ttcctacata ccacttcatg atactgccat ttgttctgca
4021 tacctcagac agactaactc caatgtatat ttctgcctta cactgggtat tagaacctct
4081 tatactaata actgtcaata gagagatttc ttcacttcta gatgagattg ggctctcatc
4141 tagagacaat ttaattagac aatttaaatt agtctaattt aaattggctt gatgtaagtt
4201 atggttgctc ttattctctg aacgtaacag cagctgaagt gaactctaat tttaggtctg
4261 cagttttaac atcttccatt tctaacttca ttatagcccc agtgtccaaa ggctgaagct
4321 aacaactaag tttcttaaca gcttatgaaa tgacatacta ccagataaca attctgacat
4381 taatcaccca gaagtaaaga cttggtattg ggaaaatgct cttaaaatta ccatttgatt
4441 agtattcatc tgccatcttt ctacactgcc aagatttgct taatataaaa ctcagatgaa
4501 acaatcgtga ggctgggaag aatgggacag ttgaaacaat aaatgcttgt catctcagaa
4561 gataagcatt aaagatggag ataaagaaaa attcatgaga cagaagatct aggcaatgat
4621 ttagaggaaa cctcctccca aaaaccccag aggaagaata tgacctgtgt ttcaaatttt
4681 gcctttctga actatttaaa attatgtgta tgtttttgct ttgtatttta aaagtaaagc
4741 tgctgtcctc aagaaacagg ctaaaaaaaa aaaaaaaaaa a
//