LOCUS BC042168 1500 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens cathepsin Z, mRNA (cDNA clone MGC:52255
IMAGE:5018854), complete cds.
ACCESSION BC042168
VERSION BC042168.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1500)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1500)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 44 Row: h Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22538441.
FEATURES Location/Qualifiers
source 1..1500
/db_xref="H-InvDB:HIT000052666"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:52255 IMAGE:5018854"
/tissue_type="Pancreas, epithelioid carcinoma"
/clone_lib="NIH_MGC_42"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1500
/gene="CTSZ"
/gene_synonym="CTSX"
/db_xref="GeneID:1522"
/db_xref="HGNC:HGNC:2547"
/db_xref="MIM:603169"
CDS 110..1021
/gene="CTSZ"
/gene_synonym="CTSX"
/codon_start=1
/product="cathepsin Z"
/protein_id="AAH42168.1"
/db_xref="GeneID:1522"
/db_xref="HGNC:HGNC:2547"
/db_xref="MIM:603169"
/translation="MARRGPGWRPLLLLVLLAGAAQGGLYFRRGQTCYRPLRGDGLAP
LGRSTYPRPHEYLSPADLPKSWDWRNVDGVNYASITRNQHIPQYCGSCWAHASTSAMA
DRINIKRKGAWPSTLLSVQNVIDCGNAGSCEGGNDLSVWDYAHQHGIPDETCNNYQAK
DQECDKFNQCGTCNEFKECHAIRNYTLWRVGDYGSLSGREKMMAEIYANGPISCGIMA
TERLANYTGGIYAEYQDTTYINHVVSVAGWGISDGTEYWIVRNSWGEPWGERGWLRIV
TSTYKDGKGARYNLAIEEHCTFGDPIV"
BASE COUNT 359 a 377 c 485 g 279 t
ORIGIN
1 gggtgctggg ccgaggccga ggccggggcg ggatccagag cgggagccgg cgcgggatct
61 gggactcgga gcgggatccg gagcgggacc caggagccgg cgcggggcca tggcgaggcg
121 cgggccaggg tggcggccgc ttctgctgct cgtgctgctg gcgggcgcgg cgcagggcgg
181 cctctacttc cgccggggac agacctgcta ccggcctctg cggggggacg ggctggctcc
241 gctggggcgc agcacatacc cccggcctca tgagtacctg tccccagcgg atctgcccaa
301 gagctgggac tggcgcaatg tggatggtgt caactatgcc agcatcaccc ggaaccagca
361 catcccccaa tactgcggct cctgctgggc ccacgccagc accagcgcta tggcggatcg
421 gatcaacatc aagaggaagg gagcgtggcc ctccaccctc ctgtccgtgc agaacgtcat
481 cgactgcggt aacgctggct cctgtgaagg gggtaatgac ctgtccgtgt gggactacgc
541 ccaccagcac ggcatccctg acgagacctg caacaactac caggccaagg accaggagtg
601 tgacaagttt aaccaatgtg ggacatgcaa tgaattcaaa gagtgccacg ccatccggaa
661 ctacaccctc tggagggtgg gagactacgg ctccctctct gggagggaga agatgatggc
721 agaaatctac gcaaatggtc ccatcagctg tggaataatg gcaacagaaa gactggctaa
781 ctacaccgga ggcatctatg ccgaatacca ggacaccaca tatataaacc atgtcgtttc
841 tgtggctggg tggggcatca gtgatgggac tgagtactgg attgtccgga attcatgggg
901 tgaaccatgg ggcgagagag gctggctgag gatcgtgacc agcacctata aggatgggaa
961 gggcgccaga tacaaccttg ccatcgagga gcactgtaca tttggggacc ccatcgttta
1021 aggccatgtc actagaagcg cagtttaaga aaaggcatgg tgacccatga ccagagggga
1081 tcctatggtt atgtgtgcca ggctggctgg caggaactgg ggtggctatc aatattggat
1141 ggcgaggaca gcgtggcact ggctgcgagt gttcctgaga gttgaaagtg ggatgactta
1201 tgacacttgc acagcatggc tctgcctcac aatgatgcag tcagccacct ggtgaagaag
1261 tgacctgcga cacaggaaac gatgggacct cagtcttctt cagcagagga cttgatattt
1321 tgtatttggc aactgtgggc aataatatgg catttaagag gtgaaagagt tcagacttat
1381 caccattctt atgtcacttt agaatcaagg gtgggggagg gagggaggga gttggcagtt
1441 tcaaatcgcc caagtgatga ataaagtatc tggctctgca cgaaaaaaaa aaaaaaaaaa
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