LOCUS BC042137 1576 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens X-ray repair complementing defective repair in Chinese
hamster cells 2, mRNA (cDNA clone MGC:52225 IMAGE:5801996),
complete cds.
ACCESSION BC042137
VERSION BC042137.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1576)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1576)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 44 Row: n Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4885656.
FEATURES Location/Qualifiers
source 1..1576
/db_xref="H-InvDB:HIT000052656"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:52225 IMAGE:5801996"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_47"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1576
/gene="XRCC2"
/db_xref="GeneID:7516"
/db_xref="HGNC:HGNC:12829"
/db_xref="MIM:600375"
CDS 62..904
/gene="XRCC2"
/codon_start=1
/product="X-ray repair complementing defective repair in
Chinese hamster cells 2"
/protein_id="AAH42137.1"
/db_xref="GeneID:7516"
/db_xref="HGNC:HGNC:12829"
/db_xref="MIM:600375"
/translation="MCSAFHRAESGTELLARLEGRSSLKEIEPNLFADEDSPVHGDIL
EFHGPEGTGKTEMLYHLTARCILPKSEGGLEVEVLFIDTDYHFDMLRLVTILEHRLSQ
SSEEIIKYCLGRFFLVYCSSSTHLLLTLYSLESMFCSHPSLCLLILDSLSAFYWIDRV
NGGESVNLQESTLRKCSQCLEKLVNDYRLVLFATTQTIMQKASSSSEEPSHASRRLCD
VDIDYRPYLCKAWQQLVKHRMFFSKQDDSQSSNQFSLVSRCLKSNSLKKHFFIIGESG
VEFC"
BASE COUNT 431 a 339 c 341 g 465 t
ORIGIN
1 gttggtgaat ggcgttggtg gcgggaaagt tgagtctctc ctgcgccgag ccttcggggc
61 gatgtgtagt gccttccata gggctgagtc tgggaccgag ctccttgccc gacttgaagg
121 tagaagttcc ttgaaagaaa tagaaccaaa tctgtttgct gatgaagatt cacctgtgca
181 tggtgatatt cttgaatttc atggcccaga aggaacagga aaaacagaaa tgctttatca
241 cctaacagca cgatgtatac ttcccaaatc agaaggtggc ctggaagtag aagtcttatt
301 tattgataca gattaccact ttgatatgct ccggctagtt acaattcttg agcacagact
361 atcccaaagc tctgaagaaa taatcaaata ctgcctggga agattttttt tggtgtactg
421 cagtagtagc acccacttac ttcttacact ttactcacta gaaagtatgt tttgtagtca
481 cccatctctc tgccttttga ttttggatag cctgtcagct ttttactgga tagaccgcgt
541 caatggagga gaaagtgtga acttacagga gtctactctg aggaaatgtt ctcagtgctt
601 agagaagctt gtaaatgact atcgcctggt tctttttgca acgacacaaa ctataatgca
661 gaaagcctcg agctcatcag aagaaccttc tcatgcctct cgacgactgt gtgatgtgga
721 catagactac agaccttatc tctgtaaggc atggcagcaa ctggtgaagc acaggatgtt
781 tttctccaaa caagatgatt ctcaaagcag caaccaattt tcattagttt cacgttgttt
841 aaaaagtaac agtttaaaaa aacatttttt tattattgga gaaagtgggg ttgaattttg
901 ttgatataca tcataaaata gtcttttgca gggtactacg caagccttaa aatttttctt
961 aagacagagt cttgctctgt ctcccaggct ggagtgcagt ggcacaatca tggctcactg
1021 cagccttgaa ctcctggcct caagggatcc tcctatgtgt gcctcctaga gtgcagggat
1081 tacaggcgtg agccactgct cgtggccaaa agttttcttt tttttttttt ctttttgaaa
1141 cagtcttact ctgtctccca ggctgctgga gtgcagtggc acaatctcgg cccgctgcag
1201 cctctgcctc ttgggttcaa gtgattcttc cacctcagcc tcccaggtag ctgggattac
1261 aggcacccac caccacgcct ggctaatttt tgtattttta atagagacgg ggtttcacca
1321 tgttggccag gctggtctcg aactcctgac ctcaagtgat ccacccacct cggcctccca
1381 aagtgctagg attacaggcc cgtgcccagc cctaaagttt taaactctag gggaattaac
1441 agtatttctt tacagaatgg atttgttaaa ctagcacagt aaaagtaaag actattctgt
1501 ttctaggctg ttgaatcaaa gtgattttag caattaaact ttgtattaat ttaaaaaaaa
1561 aaaaaaaaaa aaaaaa
//