LOCUS BC042107 3630 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens hypothetical MGC50722, mRNA (cDNA clone MGC:50722
IMAGE:5170879), complete cds.
ACCESSION BC042107
VERSION BC042107.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3630)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3630)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-DEC-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 88 Row: c Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 42733591.
FEATURES Location/Qualifiers
source 1..3630
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:50722 IMAGE:5170879"
/tissue_type="Brain, adult medulla"
/clone_lib="NIH_MGC_119"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3630
/gene="MGC50722"
/db_xref="GeneID:399693"
CDS 241..3102
/gene="MGC50722"
/codon_start=1
/product="hypothetical MGC50722"
/protein_id="AAH42107.1"
/db_xref="GeneID:399693"
/translation="MPTLVVGTPPTCLGDTPQPCHKNSQRQGPFSHGAPGRAADWKAV
AKPRLCAPAAEDDVAALRWPGPSQQPDPPWAAPHVVGSDDLKEPGPWGKACSLPMWST
GPEARDGDSSVSSGRLSCSSGGHDVCVSWKERPPQVLGPQQRPRKSDARLEQLRDKIR
AQAWQQGSCASLGTSAPSSASRLHKASTLTLRRKGQEAKNPPPAPECSGFSILSAAER
RVEAKASHGQGRELSRVSQHQVPVLREKPKRVKSSSCKREKTPKLPSPRRAAKDKHKD
EDSELVGVYAWRKGQALVRSLLGPPPVLRRHHSKDPSRDPALTVDLGDSEKVIAAKCS
PVCAQLPDATSAHSDQQVSGNTPSLASFDQPATIQTAMAILQDLRQQIQAGLELAQAR
KGGQELGPSKRRLQDVAGRGRCRDPNAQSSFSKSPWAMTERKHSSLERARSVHTWEPW
SSSTARESCPQRAWGAQGQDRSFQRPESPHERLGHFSQRPWSALAGQACSPQRAWGAQ
RQGPSSQRPGSPPEKRSPFPQQPWSAVATQPCPRRAWTACETWEDPGPRLRNPLERPS
PPAQRPWSSSGVQRAGPQGKGRGIGSPVSAAKHALPRPTGSFPQNPLGKEKDTLRPCP
RSRGLLGPSHSSESLREFMRQKAQARRRQALEEKASALRTRELRSRRLQEVYRQQREA
VLGRAVPVVSRTTPGIVTFVPSSAQSGGLEASGSLESPVLEWSKVTSGMVLGGQEAPG
SFCLCLNRAWNHAETLDPPGMGGPQDGRDAPVLLSASPSLGSLELQDLTTRYLPRGMC
IYLDPKEAEHLGTSSSLHLRHKQAQLQALETTAKVLKQRVDSLTAKLQGAEAPDTVRD
PAVGLLRSCPHSLPAAPTLATPTLATPACPGALGPNWGRGAPGEWVSMQPQPLLPPTY
FLEGETLSWGPSWEQQQSVSPRAHCESKPRGVSQAPLLL"
BASE COUNT 751 a 1205 c 1156 g 518 t
ORIGIN
1 cagcccaggg ccgggctgcc caccgtgcca gcccagtttc aatgacccac ctgagggttt
61 ccatcgtggg ccaggggacc ggcgcaggcg ggcatccgga gccaggcagt ggccagccca
121 tcccgggcag ggtcataggt ggggctgcag gcctcgaagc cgccatgtga aggcagcagc
181 gaccccaggc agggcgggcc aggttgacct tgcacctgct ctcccctcag ccccgcggcc
241 atgccgaccc tggtcgtggg cacgccgccc acctgcctgg gggacacacc tcagccctgc
301 cacaagaaca gccagaggca gggccccttc tcccatgggg ccccagggag agcagccgac
361 tggaaggctg ttgccaagcc caggctctgc gcacctgcag ctgaggatga cgtggcagcc
421 ctgaggtggc ccgggccctc ccagcagcca gacccaccct gggcagctcc ccacgtggtc
481 gggtctgacg acctcaagga accaggcccc tgggggaagg cgtgcagcct gcccatgtgg
541 tccacaggcc cggaggctag ggatggggac agctcggtgt catcgggccg cctctcgtgc
601 tcttcggggg gccacgacgt gtgtgtgtct tggaaggaga ggccacccca ggtgttgggg
661 ccccagcaga ggcccagaaa gagtgacgcg cggctggagc agctgagaga caagatccgg
721 gcccaggcgt ggcagcaggg gagctgtgcg tccctgggca cctcagcccc ctccagcgcc
781 tccagactcc acaaagcctc cacgctgacg cttaggagga aaggccaaga ggcaaaaaat
841 ccccctccag cccctgaatg ctcaggtttc agcatcttga gtgcagctga gcgcagagtt
901 gaagccaagg catcccacgg ccaggggcgc gagctctcca gggtctccca gcaccaggtt
961 cctgttctga gggaaaaacc caaaagggtc aaaagcagtt cttgcaaaag agagaagacc
1021 cccaagttgc cctcccctag aagagcggcc aaagacaaac acaaagacga agattcggag
1081 ctggttggtg tttacgcctg gagaaaggga caagctctgg tgaggtcgct gcttgggccc
1141 cctcccgtcc tccgcaggca ccatagcaag gatccctcga gagacccggc tctcaccgtg
1201 gacttaggag acagcgagaa agtcatagct gccaagtgct caccggtttg tgcccagttg
1261 cccgatgcca cctccgccca cagtgaccag caggtgtctg ggaacacacc cagcctggct
1321 tccttcgacc agccagcgac catacagacg gccatggcca tcctacaaga cctgcgccag
1381 caaatccagg ctgggctgga gctggcccag gcccgcaagg gagggcaaga gctcgggcca
1441 tcaaagcgga ggctgcagga cgtggcaggg aggggccgct gcagggaccc caatgcccag
1501 agctccttct ctaagagtcc ctgggccatg acagagagga agcattcctc tttagagagg
1561 gctaggagtg tccacacctg ggagccctgg agctcctcca ctgcacggga gtcctgtccg
1621 cagagggcct ggggggccca aggacaggac cgctccttcc agaggccgga gagtccccat
1681 gagaggttgg gccacttctc ccagaggccc tggagtgcac tggctgggca ggcctgcagt
1741 ccgcagaggg cctggggggc ccaaagacag ggcccctcct cccagaggcc tgggagcccc
1801 cctgaaaagc ggagcccctt cccccagcag ccctggagtg ctgtagccac acagccctgt
1861 ccacggaggg cctggactgc ctgtgaaacc tgggaggacc ctggccccag actgcggaac
1921 cctctggaaa ggcccagtcc tccagcccag cggccctgga gcagctccgg cgtgcagagg
1981 gccggccccc agggcaaggg cagaggcatc ggctcccccg tctcggctgc caagcatgcc
2041 ctgccaaggc ccaccgggag cttccctcag aacccacttg ggaaggagaa ggacacgctg
2101 cggccctgcc ccaggtcccg ggggctcctg ggaccctcgc acagctctga gtccttgcgg
2161 gagttcatgc gccagaaggc gcaggcccgg cggcggcagg ccctggagga gaaggcctcg
2221 gccctgcgca cacgggagct gaggagccgg aggctgcagg aggtctaccg gcagcagagg
2281 gaggccgtcc tcggcagggc ggtccccgtg gtctcccgga ccacccctgg catcgtgacc
2341 tttgtcccca gttctgcaca gtccgggggc ctggaagcct ccgggagcct ggagtcccca
2401 gtgctggaat ggagcaaagt gacctctggc atggtgctgg ggggccagga agccccaggc
2461 agcttctgcc tgtgtttgaa cagagcctgg aaccatgctg agaccctaga tcccccaggg
2521 atggggggcc cccaagatgg ccgggatgcc cccgtgctgc tgtcagcttc accctctctg
2581 ggatccctgg agctccagga cctgaccacc cgctacctac cccgggggat gtgcatctac
2641 ctggacccga aggaggctga gcacctgggc acttccagct ccctgcacct ccggcataag
2701 caggcgcagc tgcaggcgct agagaccaca gccaaagtcc tcaagcagcg ggtcgatagc
2761 ctcaccgcca agcttcaggg tgccgaagcg ccggacaccg tcagggaccc agctgtgggc
2821 ctgctgcgct cgtgccccca cagcctacct gccgccccca cgctcgccac ccccacgctt
2881 gccaccccag cctgccctgg agccttgggg cccaactggg gcagaggggc acctggggag
2941 tgggtgagca tgcagcccca gccccttctg cccccgacct acttcctgga gggcgagaca
3001 ctgtcgtggg gccccagctg ggagcaacag cagagtgtga gcccgagggc ccactgcgag
3061 agcaagcccc gaggtgtgtc tcaggctcct ctcctgctgt gatggcttgg gtcccccgtc
3121 ccgtgctccc ggctgaccag ggagtgaagc caggtgccct cttctccaag gttttccaga
3181 ggagggacac gtggacgtga aaccagacaa aaggctgcag agaggcgtgg cccccttcca
3241 ggccctcagc ccctctgcgg ggagctcata tgcgggccca gccacgctgc accctatctg
3301 gggctccctg ggactggagg agacgccgtc ggtcggaggg gcagattctg tggcgccctg
3361 caccccccgg agctgcggta agggcgaccc tgcggacagg ccctgggctg gctggtcggg
3421 tggccggggc atccaccgag aacaccttcc actgcctagc actcgagctt ggccctacgg
3481 ggtagagaaa tccttttcca cgtggagagc atccacgcct cgttattaaa ggttttagag
3541 gctaaaaaaa aaaaaaaaaa taaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
3601 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//