LOCUS BC042075 3619 bp mRNA linear HUM 21-OCT-2003 DEFINITION Homo sapiens collagen, type XXII, alpha 1, mRNA (cDNA clone IMAGE:5742944), partial cds. ACCESSION BC042075 VERSION BC042075.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3619) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3619) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (23-DEC-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Life Technologies, Inc. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 88 Row: k Column: 21. FEATURES Location/Qualifiers source 1..3619 /db_xref="H-InvDB:HIT000097104" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:5742944" /tissue_type="Brain, adult medulla" /clone_lib="NIH_MGC_119" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene <1..3619 /gene="COL22A1" /db_xref="GeneID:169044" CDS <1..2566 /gene="COL22A1" /codon_start=2 /product="COL22A1 protein" /protein_id="AAH42075.1" /db_xref="GeneID:169044" /translation="CILAAKTAPGLKQLNGEPGERGEDGLPGKPGLRGEIGEQGLAGR PGEKGEAGLPGAPGFPGVRGEKGDQGEKGELGLPGLKGDRGEKGEAGPAGPPGLPGTT SLFTPHPRMPGEQGPKGEKGDPGLPGEPGLQGRPGELGPQGPTGPPGAKGQEGAHGAP GAAGNPGAPGHVGAPGPSGPPGSVGAPGLRGTPGKDGERGEKGAAGEEGSPGPVGPRG DPGAPGLPGPPGKGKDGEPGLRGSPGLPGPLGTKGDRGAPGIPGSPGSRGDPGIGVAG PPGPSGPPGDKGSPGSRGLPGFPGPQGPAGRDGAPGNPGERGPPGKPGLSSLLSPGDI NLLAKDVCNDCPPGPPGLPGLPGFKGDKGVPGKPGREGTEGKKGEAGPPGLPGPPGIA GPQGSQGERGADGEVGQKGDQGHPGVPGFMGPPGNPGPPGADGIAGAAGPPGIQGSPG KEGPPGPQGPSGLPGIPGEEGKEGRDGKPGPPGEPGKAGEPGLPGPEGARGPPGFKGH TGDSGAPGPRGESGAMGLPGQEGLPGKDGDTGPTGPQGPQGPRGPPGKNGSPGSPGEP GPSGTPGQKGSKGENGSPGLPGFLGPRGPPGEPGEKGVPGKEGVPGKPGEPGFKGERG DPGIKGDKGPPGGKGQPGDPGIPGHKGHTGLMGPQGLPGENGPVGPPGPPGQPGFPGL RGESPSMETLRRLIQEELGKQLETRLAYLLAQMPPAYMKSSQGRPGPPGPPGKDGLPG RAGPMGEPGRPGQGGLEGPSGPIGPKGERGAKGDPGAPGVGLRGEMGPPGIPGQPGEP GYAKDGLPGIPGPQGETGPAGHPGLPGPPGPPGQCDPSQCAYFASLAARPGNVKGP" BASE COUNT 912 a 941 c 1100 g 666 t ORIGIN 1 ctgcattctg gctgcaaaaa cagctcctgg tttgaaacaa cttaatggag aaccaggaga 61 aagaggggaa gatggtctgc ctggaaaacc aggccttcgg ggagaaattg gggagcaggg 121 cctggcaggc cgacctggag agaagggaga agcaggcctc ccaggggctc caggcttccc 181 aggtgtgaga ggagagaaag gagaccaggg agaaaaaggt gaactgggac ttccaggact 241 gaaaggtgac cgaggtgaaa agggtgaagc tggtcctgca ggccctcccg ggttacctgg 301 aactacatcc ctgttcacac cacatccacg gatgcccgga gaacaagggc ccaaaggaga 361 gaagggcgat ccaggcctgc ctggggaacc gggactgcag ggccgtcctg gagaattggg 421 gcctcaggga cccactggac caccgggtgc caagggacag gaaggtgcac atggggctcc 481 tggagcagct ggaaaccccg gtgctcccgg acatgtcggt gcccccggtc ccagtggccc 541 tccaggaagt gtgggtgctc ccggcctcag aggcacccca gggaaagatg gggagcgtgg 601 tgagaagggt gcagcggggg aagaaggcag cccagggcca gttggtccca ggggagatcc 661 tggtgctcct gggctccctg ggccgcccgg aaaagggaag gatggagagc cgggactccg 721 tggatcacct ggactccctg gacccctagg aaccaagggg gatcgaggag ctcctgggat 781 ccctggttct cctggcagcc gtggtgaccc aggcattggg gttgctggcc ctcctggccc 841 ttccggacca ccaggagaca aaggatcccc gggatcacga ggcttacctg gattccctgg 901 cccccagggc ccagccggcc gggacggtgc accaggaaat ccaggagaaa gagggcctcc 961 tggcaagccg ggcctctctt cactactgtc tccaggggac ataaatctct tggctaagga 1021 tgtgtgcaat gactgccctc ctggcccccc aggcctccct ggtctaccag gttttaaagg 1081 ggacaaaggt gtcccaggaa agccagggag agaaggcaca gaagggaaaa agggagaggc 1141 tgggcctcca ggcctaccag ggcccccagg aatagctgga ccacagggaa gtcaaggaga 1201 acgtggtgca gatggtgagg ttgggcagaa aggtgatcag ggtcatcctg gagttccagg 1261 tttcatgggg cccccaggga accccgggcc accaggggca gatggaattg caggagctgc 1321 tggaccacca ggaatccaag ggtcacctgg gaaagaaggc cctcctggcc cccaaggccc 1381 atctggatta cccggaatcc caggagaaga aggcaaagag ggcagagatg gaaagccggg 1441 tccccctgga gagccgggca aagcaggaga gccaggtcta ccaggaccag agggtgcccg 1501 aggcccacct ggcttcaagg gacacacagg cgattctggt gcacccggtc cccggggaga 1561 gtctggtgcc atggggcttc ctggtcagga agggttacca ggaaaagatg gtgacactgg 1621 acccactggg ccacagggtc cccaaggacc aaggggccca ccgggcaaga atggatcacc 1681 gggatctcca ggagagcctg gcccttcagg aacccctggc cagaaaggaa gcaaagggga 1741 aaatggcagc ccaggacttc ctggcttcct gggtccccgt gggcctccgg gagaaccagg 1801 agagaaagga gtcccaggca aggagggggt ccctgggaag cctggagagc ctggattcaa 1861 aggagaaagg ggagatcctg ggatcaaagg tgacaaagga cctcctggtg gaaaaggcca 1921 gcctggggac cctggaatcc caggccacaa aggccacaca ggcctgatgg gtccccaagg 1981 actacctggg gagaatggac cagttggacc cccagggcct ccaggccagc cgggatttcc 2041 aggactgagg ggggagtctc catccatgga aaccctgcgt cggcttattc aagaagagct 2101 ggggaagcag cttgaaacca gactcgccta cctcctggcc cagatgcccc cggcgtacat 2161 gaagtcatct caaggcagac ctgggccccc agggccccct ggaaaagatg ggcttccagg 2221 ccgggccggc cccatggggg agccaggtcg tcctgggcag gggggtctgg aaggaccctc 2281 tggacccata ggtcccaaag gtgagcgagg agccaaaggt gacccaggtg cacctggagt 2341 tggcctccga ggcgagatgg gaccccctgg aatcccaggt caacccgggg aacctggcta 2401 tgctaaagat ggacttcctg ggatccctgg ccctcaaggg gagacaggac cagctggaca 2461 tcctggcctc ccaggacctc ccggtccccc aggccaatgt gacccttccc agtgtgccta 2521 cttcgccagc cttgctgccc ggccgggtaa tgtgaagggt ccctaaagga ctctggaaag 2581 ccagaagact gcagtggatt tctgaaactt gaactcagag cccagtggga agccagaggt 2641 cttgaaagac ttcagccatg tgttcctttt tttttctttc ttttatcgtt tgctttttgt 2701 tttattttct tgagagacct caaaattatt aaatccaaca gacgctgccg gtcggtcaga 2761 ttattattaa tattattgtt gttgttaatt attattatta tttcatatgc tgatgctttg 2821 tgagttcttt tccactcctt taaagttggg aaaacttgat tcgtggggca ggagattgtt 2881 tcttcattct tctgacagcc cccatctgac gcgtaactgc ccattttaag gaaactcttg 2941 gtgctacaaa accctgacca gacacttggc aaatttacct ctttcttcaa aagaaaaact 3001 ttaagaaaat gagccaatgg gcttcattct cagtcatgcc cggagatcac ccaggagaaa 3061 taatacaaac accaccactg tccagagaga gtaaagaagc agaaagagaa agaatttgca 3121 accatgagga atgttcccac ctcccgacgg gacgtgcatt tggaaaacac agaatcagcc 3181 ctcagggtgc actccagcca cctcagtgct ctaagctcac agaagtgaaa taatgtctgt 3241 gggttggcaa tggctttgtg ggatcatatg tcttggccaa agatgggaaa acctatgttg 3301 aagaggcagc ccttgagtgt taatttgtct tctaaactgt gtaaggcccc ttcaagttcc 3361 tcttgttggt ttcaattata ttaattataa aacaagtgga tgtggtgacc atccacttgt 3421 gtttccctaa tgatgggcag ttggccaggg cactgaccag agctgggaaa tttgtatctc 3481 caaggcggct ctgtctctga aataaatggc atcaagtgca tgtgtgtatg cgacatgccc 3541 tgcctgaaca ggtgctcaat aaatccaagt ttccttcaaa aaaaaaaaaa aaaaaaaaaa 3601 aaaaaaaaaa aaaaaaaaa //